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PDBsum entry 3lib

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Pore analysis for: 3lib calculated with MOLE 2.0 PDB id
3lib
Pores calculated on whole structure Pores calculated excluding ligands

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17 pores, coloured by radius 22 pores, coloured by radius 22 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.10 2.45 53.4 -0.82 -0.30 17.5 73 3 4 2 6 1 0 0  
2 1.72 1.85 64.1 -2.27 -0.81 26.6 82 4 12 7 4 0 1 0  
3 2.31 2.40 68.3 -1.94 -0.56 27.3 81 5 11 3 4 1 1 0  
4 1.75 1.91 76.2 -1.98 -0.44 22.4 77 3 9 5 4 3 1 0  
5 1.46 1.84 77.0 -2.23 -0.60 27.5 79 5 13 8 5 3 2 0  
6 1.17 1.37 83.2 -1.28 -0.41 25.0 74 1 8 0 4 3 3 0  
7 1.16 1.34 90.7 -1.42 -0.40 18.8 79 7 11 3 6 5 2 0  
8 1.25 1.42 94.0 -1.33 -0.45 16.0 83 4 7 4 6 3 2 0  
9 1.73 2.65 94.4 -0.93 -0.34 12.8 80 1 6 7 8 2 1 0  
10 1.87 1.86 100.8 -2.31 -0.73 20.2 83 2 8 9 5 2 1 0  
11 1.19 1.39 104.9 -1.52 -0.55 23.4 79 7 14 2 7 3 3 0  
12 1.16 1.33 103.3 -1.87 -0.48 21.3 80 7 10 8 5 5 3 0  
13 1.45 1.84 117.0 -1.74 -0.60 20.4 80 4 16 9 8 1 2 0  
14 1.47 1.83 123.0 -1.85 -0.62 20.8 81 4 15 13 9 1 2 0  
15 1.17 1.33 142.6 -1.75 -0.34 23.0 78 10 13 5 7 8 4 0  
16 2.36 2.42 142.4 -1.78 -0.62 21.9 81 7 22 6 4 3 2 0  
17 1.16 1.32 140.7 -1.45 -0.41 16.8 80 7 13 5 5 7 2 0  
18 2.11 2.73 145.4 -2.32 -0.64 27.1 79 9 24 15 9 5 4 0  
19 1.16 1.33 151.3 -1.50 -0.41 20.6 80 12 12 3 8 8 5 0  
20 1.67 1.79 150.8 -2.07 -0.63 24.0 80 8 20 11 4 4 3 0  
21 2.48 4.86 194.2 -1.92 -0.49 24.9 79 11 24 8 6 6 4 0  
22 1.23 1.40 220.8 -1.41 -0.45 22.3 79 15 22 4 13 6 5 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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