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PDBsum entry 3l2p
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Pore analysis for: 3l2p calculated with  MOLE 2.0
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PDB id
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3l2p
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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6 pores,
coloured by radius |
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6 pores,
coloured by radius
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6 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.51 |
1.66 |
26.7 |
-1.36 |
-0.64 |
19.4 |
79 |
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4 |
1 |
0 |
1 |
0 |
0 |
0 |
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DC 14 C DG 15 C DG 16 C DG 20 C DC 25 D DA 26 D
DT 28 D DC 29 D
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2 |
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1.85 |
1.85 |
29.7 |
-0.04 |
-0.40 |
7.6 |
71 |
1 |
1 |
1 |
1 |
1 |
1 |
0 |
DC 8 B DG 9 B DC 36 D DG 37 D DC 38 D DA 39 D DT
40 D
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3 |
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1.50 |
1.65 |
35.1 |
-1.53 |
-0.54 |
18.9 |
79 |
7 |
0 |
2 |
2 |
0 |
1 |
0 |
DG 9 B DG 20 C DT 28 D DC 29 D DC 30 D DT 40 D
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4 |
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2.20 |
2.21 |
40.4 |
-1.79 |
-0.55 |
22.8 |
81 |
6 |
1 |
2 |
3 |
0 |
1 |
0 |
DG 9 B DC 14 C DG 15 C DG 16 C DC 25 D DA 26 D DT
28 D DC 29 D DC 30 D DT 40 D
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5 |
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2.38 |
2.54 |
43.8 |
-1.36 |
-0.51 |
16.1 |
86 |
5 |
0 |
2 |
0 |
1 |
0 |
0 |
DA 5 B DT 6 B DG 7 B DC 8 B DG 9 B DT 10 B DG 12
C DC 33 D DG 34 D DT 40 D
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6 |
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1.51 |
1.66 |
56.4 |
-1.16 |
-0.46 |
14.6 |
80 |
7 |
0 |
1 |
1 |
1 |
0 |
0 |
DA 5 B DT 6 B DG 7 B DC 8 B DG 9 B DG 12 C DG 20
C DT 28 D DC 29 D DC 30 D DG 31 D DA 32 D DC 33 D
DG 34 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program