PDBsum entry 3l1c Go to PDB code:  Tunnel analysis for: 3l1c calculated with MOLE 2.0 PDB id 3l1c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.17 2.39 28.0 2.35 0.72 2.5 76 1 0 1 9 1 0 1   2 1.22 1.49 19.3 -1.37 -0.39 15.5 82 2 1 3 2 2 0 0   3 1.16 1.25 19.7 1.04 0.40 11.1 72 1 1 0 6 1 1 0   4 1.15 1.25 24.2 0.82 0.44 10.5 69 2 0 0 5 1 2 0   5 1.28 1.42 20.6 0.59 0.12 11.9 82 1 2 0 8 1 0 0   6 1.25 1.41 23.6 0.53 0.41 12.8 79 2 1 0 5 1 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.