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PDBsum entry 3kv8

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3kv8 calculated with MOLE 2.0 PDB id
3kv8
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.25 1.47 18.8 0.30 0.10 13.8 79 4 0 0 5 1 1 0  
2 1.25 2.33 42.2 0.98 0.12 5.6 76 2 1 0 8 2 2 0  FAH 140 B FAH 141 B
3 1.09 1.37 15.3 -0.07 -0.05 13.6 81 2 1 0 4 1 1 0  
4 1.87 2.06 18.0 0.85 0.25 12.2 78 1 2 0 5 2 0 0  FAH 142 A
5 1.84 1.87 25.2 0.56 0.03 11.2 78 3 2 0 6 3 0 0  FAH 140 A FAH 142 A FAH 143 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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