PDBsum entry 3knh

Ribosome/antibiotic

PDB id: 3knh

DNA/RNA chain(s) highlighted

(click to view)

Contents

Protein chains

235 a.a.

207 a.a.

208 a.a.

151 a.a.

101 a.a.

155 a.a.

138 a.a.

127 a.a.

99 a.a.

119 a.a.

125 a.a.

120 a.a.

60 a.a.

88 a.a.

84 a.a.

100 a.a.

70 a.a.

79 a.a.

99 a.a.

25 a.a.

DNA/RNA

Ligands

KBE-DPP-SER-SER-UAL-5OH

Metals

_MG ×160

_ZN

Nucleic acid sequences

Chain (1495 bases)

Sequence:

U-G-G-A-G-A-G-U-U-U-G-A-U-C-C-U-G-G-C-U-C-A-G-G-G-U-G-A-A-C-G-C-U-G-G-C-G-G-C-
-G-G-C-A-C-U-G-A-G-A-C-A-C-G-G-G-C-C-C-C-A-C-U-C-C-U-A-C-G-G-G-A-G-G-C-A-G-C-A-
-G-G-G-A-G-C-G-U-G-G-G-A-U-A-C-G-C-U-C-A-G-G-C-U-A-G-A-C-G-G-U-G-G-G-A-G-A-G-G-
-C-A-C-A-A-G-C-G-G-U-G-G-A-G-C-A-U-G-U-G-G-U-U-U-A-A-U-U-C-G-A-A-G-C-A-A-C-G-C-
-A-C-G-U-G-C-U-A-C-A-A-U-G-C-C-C-A-C-U-A-C-A-A-A-G-C-G-A-U-G-C-C-A-C-C-C-G-G-C-

Chain (10 bases)

• Sequence: A-A-A-A-U-G-C-A-G-U

Chain (75 bases)

• Sequence: U-G-G-G-G-U-A-U-C-G-C-C-A-A-G-C-G-G-U-A-A-G-G-C-A-; C-C-G-G-A-U-U-C-U-G-A-U-U-C-

Chain (77 bases)

• Sequence: C-G-C-G-G-G-G-U-G-G-A-G-C-A-G-C-C-U-G-G-U-A-G-C-U-; C-G-U-C-G-G-G-C-U-C-A-U-A-A-

Chain (75 bases)

• Sequence: U-G-G-G-G-U-A-U-C-G-C-C-A-A-G-C-G-G-U-A-A-G-G-C-A-; C-C-G-G-A-U-U-G-U-G-A-U-U-C-