PDBsum entry 3kn0 Go to PDB code:  Tunnel analysis for: 3kn0 calculated with MOLE 2.0 PDB id 3kn0 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.11 1.12 18.8 -0.05 -0.31 7.0 67 0 1 2 1 1 1 1   2 1.07 1.12 18.8 -0.28 -0.42 8.4 64 0 1 1 1 1 1 1   3 1.11 1.12 20.5 -0.99 -0.58 13.8 80 2 1 1 2 0 1 1   4 1.12 1.12 22.4 -0.50 -0.54 9.7 78 1 1 2 3 1 1 1   5 1.06 1.12 25.2 -1.20 -0.56 15.6 80 3 1 2 2 0 1 1   6 1.07 1.07 18.5 2.16 0.74 1.1 76 0 0 2 7 3 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.