 |
PDBsum entry 3kb7
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 3kb7 calculated with MOLE 2.0
|
PDB id
|
|
|
|
3kb7
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
3 tunnels,
coloured by tunnel radius |
 |
4 tunnels,
coloured by
tunnel radius
|
4 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.41 |
2.37 |
20.4 |
0.08 |
0.02 |
16.2 |
71 |
 |
2 |
3 |
0 |
4 |
2 |
0 |
1 |
 |
071 1 A
|
 |
 |
2 |
 |
1.44 |
2.63 |
27.3 |
0.91 |
0.33 |
12.6 |
75 |
4 |
1 |
0 |
6 |
2 |
0 |
1 |
071 1 A
|
 |
3 |
 |
1.21 |
3.57 |
31.4 |
-0.73 |
-0.07 |
21.9 |
81 |
4 |
2 |
0 |
7 |
2 |
0 |
1 |
|
 |
4 |
 |
1.20 |
3.97 |
16.9 |
0.09 |
0.32 |
15.5 |
79 |
1 |
0 |
1 |
3 |
1 |
0 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |