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PDBsum entry 3k4c

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Pore analysis for: 3k4c calculated with MOLE 2.0 PDB id
3k4c
Pores calculated on whole structure Pores calculated excluding ligands

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10 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.65 1.71 39.7 -0.45 -0.25 11.8 83 3 2 2 1 2 2 0  
2 1.75 1.91 71.0 -1.22 -0.50 18.7 82 5 6 4 3 1 0 0  
3 1.28 1.62 87.2 -0.77 -0.39 11.2 86 2 4 11 12 1 4 0  
4 1.28 1.59 88.4 -0.82 -0.46 10.9 86 2 4 10 11 1 4 0  
5 1.26 1.60 88.3 -1.09 -0.50 13.1 88 5 3 11 7 2 2 0  
6 1.34 1.60 93.5 -0.91 -0.50 12.1 86 2 4 11 14 0 4 0  
7 1.22 1.58 95.1 -0.61 -0.43 10.8 90 3 5 12 12 2 2 0  
8 1.26 1.60 94.7 -0.69 -0.45 11.3 88 2 6 11 15 1 2 0  
9 1.27 1.61 97.5 -0.66 -0.44 12.0 88 3 5 13 14 1 2 0  
10 1.27 1.57 114.6 -0.66 -0.40 11.1 86 5 5 12 15 3 2 0  
11 1.12 1.32 150.2 -0.67 -0.43 11.9 86 7 7 14 17 3 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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