PDBsum entry 3jsx Go to PDB code:  Tunnel analysis for: 3jsx calculated with MOLE 2.0 PDB id 3jsx Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.24 1.34 34.5 -0.80 -0.09 6.8 84 1 1 3 8 2 5 0  FAD 601 B 2 1.24 1.34 48.7 -0.93 -0.25 9.4 85 4 2 5 7 3 3 0   3 1.24 1.34 51.5 -0.74 -0.16 11.3 81 4 4 4 8 3 4 0   4 1.28 1.36 72.7 -1.19 -0.19 12.9 82 7 2 8 7 4 5 0   5 1.20 1.24 19.7 0.05 -0.01 12.8 68 1 2 0 4 2 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.