PDBsum entry 3jc6 Go to PDB code:  Pore analysis for: 3jc6 calculated with MOLE 2.0 PDB id 3jc6 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   26 pores, coloured by radius 23 pores, coloured by radius 23 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.38 1.77 28.8 -1.27 -0.58 15.0 82 1 1 2 1 0 2 0   2 1.23 2.53 66.9 -1.17 -0.36 15.5 82 5 3 3 5 1 3 0   3 1.13 1.39 75.0 -1.42 -0.33 19.9 82 10 3 6 7 2 1 1   4 1.26 1.77 75.9 -1.89 -0.31 28.3 79 10 4 1 3 2 1 0   5 1.23 1.72 90.0 -0.67 -0.02 14.2 81 8 4 9 10 7 1 0   6 1.42 1.70 90.7 -1.42 -0.36 16.9 88 7 6 13 7 3 1 0   7 1.38 2.99 96.1 -0.88 -0.19 15.0 81 4 6 7 14 0 1 1   8 1.19 2.47 101.7 -1.51 -0.37 17.0 84 7 5 9 3 4 3 0   9 1.45 1.76 101.8 -1.92 -0.35 21.2 84 12 5 6 3 3 2 0   10 1.75 1.88 105.3 -1.31 -0.34 18.0 82 6 4 4 7 1 3 0   11 1.64 2.02 107.2 -1.29 -0.36 17.8 84 14 5 8 6 3 1 0   12 1.42 1.53 108.8 -0.51 -0.06 12.2 81 6 6 7 14 6 1 0   13 1.24 2.44 117.7 -0.87 -0.28 13.3 87 7 5 7 8 3 3 0   14 1.48 1.78 119.2 -1.40 -0.45 17.2 90 14 4 10 8 0 3 0   15 1.24 2.43 118.6 -0.94 -0.37 14.7 89 9 3 8 8 1 2 0   16 1.77 3.14 117.7 -0.37 0.08 20.2 79 7 6 3 11 2 1 0   17 1.34 1.35 152.7 -1.57 -0.40 23.2 83 15 15 12 10 4 0 0   18 1.58 1.81 152.1 -1.57 -0.33 21.5 82 15 8 9 12 3 6 0   19 1.92 2.30 157.5 -0.84 -0.36 13.5 86 10 5 10 11 0 4 0   20 1.31 1.43 167.9 -0.46 -0.24 10.6 88 7 3 12 17 0 6 0   21 1.32 2.49 179.9 -1.38 -0.29 20.0 82 15 9 10 16 6 5 0   22 1.82 3.24 190.1 -1.55 -0.26 22.9 82 22 9 11 14 6 4 0   23 2.14 2.28 207.4 -1.26 -0.35 19.7 86 24 8 15 18 3 5 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.