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PDBsum entry 3izn

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Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 3izn calculated with MOLE 2.0 PDB id
3izn
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.76 2.01 44.6 -2.39 -0.26 37.0 76 9 7 1 7 1 0 0  
2 2.45 2.52 54.1 -3.07 -0.74 40.3 79 13 12 1 1 0 1 0  
3 2.40 2.40 70.7 -3.13 -0.74 40.7 79 16 16 1 1 0 2 0  
4 2.39 2.40 93.7 -2.40 -0.77 26.7 84 11 12 6 6 1 2 0  
5 2.92 4.10 104.2 -2.54 -0.70 28.5 84 15 10 9 5 1 3 0  
6 1.69 3.31 110.9 -1.72 -0.05 25.6 76 21 11 1 22 5 0 0  
7 1.68 3.26 115.3 -2.22 -0.41 34.9 80 20 17 1 13 0 1 0  
8 2.36 2.36 114.1 -2.38 -0.75 27.8 85 10 13 7 6 1 4 0  
9 2.40 2.41 117.6 -3.36 -0.73 44.0 79 23 24 1 1 0 2 0  
10 2.32 2.33 126.0 -2.33 -0.56 33.8 81 20 21 1 11 1 3 0  
11 1.68 3.30 141.4 -2.14 -0.35 32.0 78 25 18 1 20 2 1 0  
12 2.45 2.56 143.7 -2.16 -0.51 26.4 82 20 14 8 13 3 1 0  
13 1.73 3.43 151.7 -1.63 -0.01 23.9 76 27 13 1 30 7 0 0  
14 2.34 2.30 152.2 -3.19 -0.74 41.6 79 29 31 2 2 0 3 0  
15 2.25 2.44 155.4 -2.22 -0.53 27.5 82 23 15 10 14 3 5 0  
16 1.75 3.35 172.9 -2.24 -0.42 32.5 79 32 26 2 21 2 2 0  
17 1.74 3.07 174.5 -1.91 -0.22 28.5 78 31 19 1 28 4 1 0  
18 1.75 3.16 177.3 -1.91 -0.10 27.7 76 36 19 2 32 6 0 0  
19 2.45 2.74 180.3 -1.85 -0.27 27.3 78 30 23 1 27 5 2 0  
20 2.39 2.46 180.8 -2.23 -0.53 33.6 82 27 29 1 19 0 3 0  
21 2.41 2.51 189.9 -2.14 -0.52 32.2 82 26 28 2 19 0 3 0  
22 1.66 2.81 207.7 -1.80 -0.16 26.8 77 37 22 1 36 6 1 0  
23 2.78 2.81 210.0 -1.82 -0.28 23.2 80 34 17 10 30 7 5 0  
24 2.78 2.81 210.1 -1.84 -0.29 23.3 80 34 17 10 29 7 5 0  
25 1.75 3.43 210.5 -1.82 -0.07 26.2 76 41 20 2 39 8 0 0  
26 2.35 2.32 225.1 -2.73 -0.75 31.9 83 29 27 12 11 2 6 0  
27 2.48 3.64 236.3 -1.94 -0.36 28.7 80 36 29 0 30 4 1 0  
28 1.75 3.13 239.1 -1.95 -0.25 28.2 78 41 28 1 34 6 0 0  
29 1.75 3.13 239.1 -1.95 -0.25 28.2 78 43 30 2 36 6 2 0  
30 1.83 3.57 255.2 -2.08 -0.36 27.2 80 44 25 11 32 6 6 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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