 |
PDBsum entry 3izn
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 3izn calculated with MOLE 2.0
|
PDB id
|
|
|
|
3izn
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
30 pores,
coloured by radius |
 |
30 pores,
coloured by radius
|
30 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.76 |
2.01 |
44.6 |
-2.39 |
-0.26 |
37.0 |
76 |
 |
9 |
7 |
1 |
7 |
1 |
0 |
0 |
 |
|
 |
 |
2 |
 |
2.45 |
2.52 |
54.1 |
-3.07 |
-0.74 |
40.3 |
79 |
13 |
12 |
1 |
1 |
0 |
1 |
0 |
|
 |
3 |
 |
2.40 |
2.40 |
70.7 |
-3.13 |
-0.74 |
40.7 |
79 |
16 |
16 |
1 |
1 |
0 |
2 |
0 |
|
 |
4 |
 |
2.39 |
2.40 |
93.7 |
-2.40 |
-0.77 |
26.7 |
84 |
11 |
12 |
6 |
6 |
1 |
2 |
0 |
|
 |
5 |
 |
2.92 |
4.10 |
104.2 |
-2.54 |
-0.70 |
28.5 |
84 |
15 |
10 |
9 |
5 |
1 |
3 |
0 |
|
 |
6 |
 |
1.69 |
3.31 |
110.9 |
-1.72 |
-0.05 |
25.6 |
76 |
21 |
11 |
1 |
22 |
5 |
0 |
0 |
|
 |
7 |
 |
1.68 |
3.26 |
115.3 |
-2.22 |
-0.41 |
34.9 |
80 |
20 |
17 |
1 |
13 |
0 |
1 |
0 |
|
 |
8 |
 |
2.36 |
2.36 |
114.1 |
-2.38 |
-0.75 |
27.8 |
85 |
10 |
13 |
7 |
6 |
1 |
4 |
0 |
|
 |
9 |
 |
2.40 |
2.41 |
117.6 |
-3.36 |
-0.73 |
44.0 |
79 |
23 |
24 |
1 |
1 |
0 |
2 |
0 |
|
 |
10 |
 |
2.32 |
2.33 |
126.0 |
-2.33 |
-0.56 |
33.8 |
81 |
20 |
21 |
1 |
11 |
1 |
3 |
0 |
|
 |
11 |
 |
1.68 |
3.30 |
141.4 |
-2.14 |
-0.35 |
32.0 |
78 |
25 |
18 |
1 |
20 |
2 |
1 |
0 |
|
 |
12 |
 |
2.45 |
2.56 |
143.7 |
-2.16 |
-0.51 |
26.4 |
82 |
20 |
14 |
8 |
13 |
3 |
1 |
0 |
|
 |
13 |
 |
1.73 |
3.43 |
151.7 |
-1.63 |
-0.01 |
23.9 |
76 |
27 |
13 |
1 |
30 |
7 |
0 |
0 |
|
 |
14 |
 |
2.34 |
2.30 |
152.2 |
-3.19 |
-0.74 |
41.6 |
79 |
29 |
31 |
2 |
2 |
0 |
3 |
0 |
|
 |
15 |
 |
2.25 |
2.44 |
155.4 |
-2.22 |
-0.53 |
27.5 |
82 |
23 |
15 |
10 |
14 |
3 |
5 |
0 |
|
 |
16 |
 |
1.75 |
3.35 |
172.9 |
-2.24 |
-0.42 |
32.5 |
79 |
32 |
26 |
2 |
21 |
2 |
2 |
0 |
|
 |
17 |
 |
1.74 |
3.07 |
174.5 |
-1.91 |
-0.22 |
28.5 |
78 |
31 |
19 |
1 |
28 |
4 |
1 |
0 |
|
 |
18 |
 |
1.75 |
3.16 |
177.3 |
-1.91 |
-0.10 |
27.7 |
76 |
36 |
19 |
2 |
32 |
6 |
0 |
0 |
|
 |
19 |
 |
2.45 |
2.74 |
180.3 |
-1.85 |
-0.27 |
27.3 |
78 |
30 |
23 |
1 |
27 |
5 |
2 |
0 |
|
 |
20 |
 |
2.39 |
2.46 |
180.8 |
-2.23 |
-0.53 |
33.6 |
82 |
27 |
29 |
1 |
19 |
0 |
3 |
0 |
|
 |
21 |
 |
2.41 |
2.51 |
189.9 |
-2.14 |
-0.52 |
32.2 |
82 |
26 |
28 |
2 |
19 |
0 |
3 |
0 |
|
 |
22 |
 |
1.66 |
2.81 |
207.7 |
-1.80 |
-0.16 |
26.8 |
77 |
37 |
22 |
1 |
36 |
6 |
1 |
0 |
|
 |
23 |
 |
2.78 |
2.81 |
210.0 |
-1.82 |
-0.28 |
23.2 |
80 |
34 |
17 |
10 |
30 |
7 |
5 |
0 |
|
 |
24 |
 |
2.78 |
2.81 |
210.1 |
-1.84 |
-0.29 |
23.3 |
80 |
34 |
17 |
10 |
29 |
7 |
5 |
0 |
|
 |
25 |
 |
1.75 |
3.43 |
210.5 |
-1.82 |
-0.07 |
26.2 |
76 |
41 |
20 |
2 |
39 |
8 |
0 |
0 |
|
 |
26 |
 |
2.35 |
2.32 |
225.1 |
-2.73 |
-0.75 |
31.9 |
83 |
29 |
27 |
12 |
11 |
2 |
6 |
0 |
|
 |
27 |
 |
2.48 |
3.64 |
236.3 |
-1.94 |
-0.36 |
28.7 |
80 |
36 |
29 |
0 |
30 |
4 |
1 |
0 |
|
 |
28 |
 |
1.75 |
3.13 |
239.1 |
-1.95 |
-0.25 |
28.2 |
78 |
41 |
28 |
1 |
34 |
6 |
0 |
0 |
|
 |
29 |
 |
1.75 |
3.13 |
239.1 |
-1.95 |
-0.25 |
28.2 |
78 |
43 |
30 |
2 |
36 |
6 |
2 |
0 |
|
 |
30 |
 |
1.83 |
3.57 |
255.2 |
-2.08 |
-0.36 |
27.2 |
80 |
44 |
25 |
11 |
32 |
6 |
6 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |