PDBsum entry 3izc Go to PDB code:  Tunnel analysis for: 3izc calculated with MOLE 2.0 PDB id 3izc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   48 tunnels, coloured by tunnel radius 48 tunnels, coloured by tunnel radius 48 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.34 1.34 19.9 -1.97 -0.47 22.1 81 5 1 1 1 1 0 0   2 1.24 1.31 44.3 -0.36 -0.24 9.7 80 7 0 2 8 1 1 0   3 1.32 2.78 44.6 -0.32 0.05 10.9 78 6 0 3 9 3 1 0   4 1.25 2.41 23.8 1.16 0.34 1.2 81 0 0 2 7 1 1 0   5 1.34 1.34 30.6 -0.56 -0.19 12.4 79 3 1 1 3 1 1 0   6 1.28 1.28 22.0 0.33 0.20 11.3 70 2 1 1 3 3 1 0   7 1.42 1.56 17.5 0.15 -0.22 6.0 90 1 0 1 3 1 0 0  UNK 154 L UNK 155 L UNK 158 L UNK 159 L UNK 162 L 8 1.15 1.45 17.8 -0.21 -0.11 14.2 78 3 0 0 3 2 0 0  UNK 144 L UNK 145 L UNK 146 L UNK 148 L UNK 151 L UNK 154 L UNK 155 L 9 1.24 1.34 18.2 0.07 -0.20 6.7 88 1 0 1 2 1 0 0  UNK 155 L UNK 156 L UNK 157 L UNK 159 L UNK 160 L UNK 161 L 10 1.23 1.77 20.4 1.64 0.73 8.8 66 2 2 1 4 2 0 0   11 1.09 2.86 18.5 1.10 0.47 15.4 83 1 2 1 6 1 0 0   12 1.08 2.85 19.6 1.06 0.44 15.0 85 1 2 1 6 1 0 0   13 1.56 2.40 17.6 -2.38 -0.26 36.6 78 3 1 0 1 1 0 0   14 1.23 1.54 15.1 0.41 0.07 16.4 82 2 1 0 6 0 0 0   15 1.20 1.31 17.0 1.85 0.48 1.2 75 0 0 0 5 0 2 0   16 1.60 1.60 18.4 2.62 0.63 0.9 86 0 0 0 7 0 0 0   17 1.17 1.35 22.3 2.10 0.65 5.2 75 1 0 0 8 0 1 0   18 1.45 1.53 27.2 0.86 -0.02 4.8 90 1 1 1 6 0 1 0   19 1.45 1.54 32.1 0.49 -0.13 6.7 84 1 2 1 6 1 2 0   20 1.13 2.76 18.7 2.40 0.69 0.9 77 0 0 1 7 1 0 0   21 1.14 2.69 20.1 3.01 0.98 0.6 72 0 0 0 8 1 0 0   22 1.12 3.29 32.2 1.78 0.44 5.7 79 1 2 1 13 3 1 0   23 1.10 3.11 37.3 1.84 0.50 4.0 83 1 1 2 14 2 1 0   24 1.15 2.98 25.7 1.46 0.48 2.7 77 1 0 2 10 2 0 0   25 1.17 3.34 30.6 1.47 0.78 9.3 75 3 0 0 8 4 0 0   26 1.15 3.05 34.0 1.42 0.41 4.5 74 1 1 1 9 4 0 0   27 1.17 3.20 35.6 1.07 0.78 7.2 74 3 0 1 7 4 1 0   28 1.35 1.43 15.9 -1.11 -0.28 8.3 84 2 0 2 4 2 0 0   29 1.27 1.38 30.8 -1.75 -0.40 13.2 81 3 0 2 4 2 0 0   30 1.20 1.20 16.0 0.80 -0.09 6.2 98 1 0 0 4 0 0 0   31 1.59 1.76 17.8 0.55 0.05 11.3 91 3 0 1 6 0 0 0   32 1.10 1.10 19.3 0.75 0.06 8.7 78 1 1 2 7 0 0 0   33 1.27 1.27 18.5 -1.97 -0.50 19.3 73 4 0 0 0 0 3 0   34 1.30 1.51 15.5 -0.01 -0.11 10.5 76 1 0 1 4 2 0 0   35 1.43 1.56 15.9 -0.95 -0.21 21.1 81 2 1 0 2 1 0 0   36 1.34 1.76 16.0 0.02 0.05 11.3 74 4 0 1 3 2 0 0   37 1.29 1.29 18.4 0.23 -0.02 10.0 81 4 0 1 3 1 0 0   38 1.24 1.24 26.4 2.33 0.56 1.9 92 0 1 1 11 0 0 0   39 1.22 1.45 18.9 -0.55 -0.26 8.3 78 1 0 2 2 0 2 0   40 1.15 2.11 20.2 0.51 0.35 11.8 91 2 1 1 7 0 0 0   41 1.16 2.34 16.4 0.09 0.05 6.3 84 0 1 2 3 1 0 0   42 1.14 2.20 18.2 0.20 0.04 4.3 84 0 1 2 3 1 0 0   43 1.17 1.30 18.6 -1.04 -0.50 8.2 89 0 1 4 2 1 0 0  UNK 178 L 44 1.12 1.12 20.4 -0.91 -0.50 6.5 89 0 1 4 2 1 0 0  UNK 178 L 45 1.33 1.43 20.0 -1.97 -0.42 23.9 79 5 1 2 1 1 0 0   46 1.39 1.42 15.5 -0.26 -0.01 7.1 78 2 0 1 3 3 0 0   47 1.17 2.02 20.1 0.42 0.11 16.0 82 3 1 0 8 0 0 0   48 1.27 1.38 15.4 -2.20 -0.73 14.5 86 4 0 3 1 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.