PDBsum entry 3ivc Go to PDB code:  Tunnel analysis for: 3ivc calculated with MOLE 2.0 PDB id 3ivc Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.14 1.54 35.3 0.54 0.09 8.9 81 3 1 2 15 2 1 0  FG4 302 A 2 1.14 1.54 45.2 -0.49 0.08 20.2 81 5 4 2 13 1 1 0  FG4 302 A 3 1.19 1.60 34.1 0.92 0.41 6.5 80 2 0 3 11 3 1 0  FG4 302 B 4 1.20 3.40 35.9 0.39 0.04 8.7 81 3 1 2 15 2 1 0  FG4 302 B 5 1.41 2.33 21.7 -2.41 -0.24 35.7 78 5 3 1 4 0 0 0  EOH 336 B 6 1.38 2.33 21.7 -1.86 -0.17 32.1 76 5 1 1 6 0 0 0  EOH 336 B 7 1.37 2.33 23.7 -1.39 -0.32 26.0 78 4 2 1 5 0 0 0  EOH 336 B 8 1.38 2.33 26.7 -1.97 -0.18 32.5 76 6 2 1 5 0 0 0  EOH 336 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.