PDBsum entry 3ikv Go to PDB code:  Tunnel analysis for: 3ikv calculated with MOLE 2.0 PDB id 3ikv Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   4 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.55 3.02 18.2 1.42 0.74 3.5 64 1 1 0 5 4 2 0   2 1.49 1.77 21.2 0.96 0.39 2.2 62 1 0 0 3 5 2 0   3 1.48 1.83 24.0 0.77 0.38 5.4 65 1 1 0 3 5 2 0   4 1.19 1.37 30.6 -0.53 -0.28 12.8 86 3 2 2 5 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.