PDBsum entry 3ikt Go to PDB code:  Pore analysis for: 3ikt calculated with MOLE 2.0 PDB id 3ikt Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   14 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.68 1.86 31.7 -2.44 -0.61 27.3 68 3 2 1 0 1 1 0  DC 12 C DG 13 C DT 6 D DG 7 D DA 8 D DT 15 D 2 1.78 2.07 34.7 -1.61 -0.52 22.0 94 4 3 4 4 0 0 0  DT 14 C DT 15 C 3 2.21 3.70 34.9 1.30 0.70 3.1 57 1 1 0 4 6 4 0  NAD 500 A 4 1.68 1.86 38.3 -1.59 -0.53 17.1 89 4 3 3 4 0 1 0   5 2.30 2.45 47.3 -1.09 -0.62 16.9 80 3 2 0 4 1 0 0  DC 12 C DG 13 C DT 14 C DT 15 C DT 6 D DG 7 D DA 8 D DG 13 D DT 14 D 6 1.60 1.69 47.7 -1.44 -0.43 20.8 87 4 4 2 4 1 1 0  DT 14 C DT 15 C 7 1.69 1.88 47.8 -2.02 -0.70 23.0 87 6 4 5 2 0 1 0  DT 14 C DT 15 C 8 1.11 1.90 57.3 -0.66 -0.23 12.9 78 4 3 3 8 2 2 0   9 2.31 2.46 58.4 -2.29 -0.71 25.0 86 6 3 6 3 1 0 0  DC 12 C DG 13 C DT 6 D DG 7 D DA 8 D DT 15 D 10 1.76 2.08 63.7 -1.05 -0.33 18.2 85 5 4 3 6 1 0 0  DC 12 C DG 13 C DT 6 D DG 7 D DA 8 D DT 15 D 11 1.63 1.66 73.1 -1.99 -0.59 23.5 85 7 7 5 4 1 2 0   12 1.06 1.89 74.0 -0.76 -0.27 14.6 77 4 2 3 9 3 1 0  DC 12 C DG 13 C DT 6 D DG 7 D DA 8 D DT 15 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.