PDBsum entry 3hyj Go to PDB code:  Tunnel analysis for: 3hyj calculated with MOLE 2.0 PDB id 3hyj Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 3 tunnels, coloured by tunnel radius 3 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.25 1.75 36.0 0.35 0.36 16.7 78 4 2 3 7 2 1 0  GOL 3731 A 2 1.25 1.75 38.3 -0.58 0.17 13.5 78 3 0 5 7 3 2 0  CL 200 D 3 1.25 1.76 46.7 -0.35 0.14 20.8 81 7 2 4 8 2 0 0  GOL 3731 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.