PDBsum entry 3hqk Go to PDB code:  Tunnel analysis for: 3hqk calculated with MOLE 2.0 PDB id 3hqk Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.16 2.19 19.6 -0.28 0.31 12.6 70 1 0 0 5 2 0 0   2 1.12 2.20 21.0 -0.28 0.30 14.0 72 2 0 0 5 2 0 0   3 1.29 1.79 15.0 -1.15 -0.59 12.0 90 0 1 3 1 1 0 0   4 1.33 2.31 18.8 1.19 0.25 5.8 79 1 0 3 5 1 0 2   5 1.29 2.45 17.2 1.59 0.84 1.0 73 0 0 0 6 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.