spacer
spacer

PDBsum entry 3hq2

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3hq2 calculated with MOLE 2.0 PDB id
3hq2
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
9 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.26 1.26 32.4 -0.41 -0.02 16.5 87 4 5 5 3 3 0 1  
2 1.26 2.27 40.2 -0.46 -0.09 16.6 88 4 6 6 5 2 0 1  
3 1.35 1.35 43.6 -1.22 -0.60 16.9 86 3 6 7 3 2 1 0  
4 1.36 1.36 44.1 -1.05 -0.61 15.6 87 3 8 5 3 2 0 0  
5 1.28 1.83 47.3 -0.75 -0.16 17.1 85 6 3 7 6 2 1 1  
6 1.14 1.24 48.2 -1.12 -0.07 18.2 78 5 3 4 8 3 1 0  
7 1.21 1.22 140.0 -1.27 -0.13 22.3 82 15 10 5 15 7 2 0  PO4 503 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer