spacer
spacer

PDBsum entry 3hhg

Go to PDB code: 
Top Page protein Protein-protein interface(s) pores links
Pore analysis for: 3hhg calculated with MOLE 2.0 PDB id
3hhg
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
17 pores, coloured by radius 17 pores, coloured by radius 17 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.24 1.95 30.9 2.23 0.65 6.7 75 2 1 1 6 2 0 0  
2 2.59 2.71 30.9 -1.11 -0.77 14.6 94 1 4 5 3 0 0 0  
3 2.16 2.73 32.2 -3.17 -0.52 34.3 80 6 3 4 0 1 1 0  
4 2.69 3.40 35.1 -1.97 -0.46 27.7 80 7 4 1 3 1 0 0  
5 1.30 1.30 37.0 -1.81 -0.50 19.5 86 5 2 4 3 0 0 0  
6 1.23 1.95 45.5 1.40 0.42 11.2 81 4 2 2 7 2 0 0  
7 1.24 1.24 45.7 -1.21 -0.27 19.9 84 4 4 2 5 1 1 0  
8 1.87 4.20 78.0 -1.38 -0.31 24.2 79 10 8 4 8 2 2 0  
9 1.41 1.41 79.8 -0.55 -0.22 14.4 75 7 3 5 5 3 1 0  
10 1.55 1.55 81.8 -1.74 -0.55 20.4 83 10 6 6 5 1 1 0  
11 1.40 1.41 86.0 -0.99 -0.28 20.1 80 7 5 6 8 2 0 0  
12 1.41 1.42 105.5 -1.36 -0.33 21.5 78 11 5 7 4 2 0 0  
13 2.35 2.96 135.0 -1.60 -0.45 21.3 84 13 11 12 7 1 2 0  
14 1.23 1.21 171.5 -2.19 -0.36 23.2 77 16 9 8 10 1 4 0  
15 1.61 2.00 175.8 -2.10 -0.40 24.3 79 17 12 8 11 0 3 0  
16 1.72 2.35 186.2 -1.90 -0.35 23.3 76 21 12 10 13 2 5 0  
17 1.18 1.15 228.7 -1.72 -0.38 23.6 82 20 14 15 15 2 4 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer