PDBsum entry 3hhf Go to PDB code:  Tunnel analysis for: 3hhf calculated with MOLE 2.0 PDB id 3hhf Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.16 2.48 49.3 1.79 0.49 3.0 65 1 0 2 15 5 2 0  MSE 103 A 2 2.31 5.15 15.6 -2.05 -0.18 29.5 84 4 1 3 2 0 1 0   3 2.33 5.93 18.3 -1.83 -0.26 30.3 80 5 3 2 2 0 0 0   4 2.31 4.93 18.9 -2.60 -0.27 35.0 80 5 3 2 2 0 0 0   5 1.95 3.93 21.4 -2.52 -0.33 37.8 79 5 4 2 2 0 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.