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PDBsum entry 3hcc

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3hcc calculated with MOLE 2.0 PDB id
3hcc
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.31 1.47 17.3 -0.82 -0.10 7.6 66 1 1 2 2 1 1 2  
2 1.28 1.31 18.5 -0.33 -0.24 9.1 60 1 1 1 1 1 1 2  
3 1.31 1.47 19.9 -1.00 -0.10 3.8 83 1 0 7 2 1 0 2  
4 1.25 1.29 21.9 -0.84 -0.22 13.2 60 2 0 1 1 1 1 2  
5 1.36 1.36 15.6 -0.32 0.01 15.5 73 2 0 0 3 0 1 0  
6 1.35 1.36 20.2 -0.42 -0.02 14.5 73 2 2 0 3 0 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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