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PDBsum entry 3hax

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Top Page protein dna_rna ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3hax calculated with MOLE 2.0 PDB id
3hax
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 9 pores, coloured by radius 9 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.58 1.59 40.6 -1.56 -0.68 17.8 78 4 1 0 0 0 1 0  G 3 E U 4 E C 5 E C 6 E G 7 E C 8 E U 45 E U 46 E
A 47 E U 48 E G 49 E G 50 E C 51 E A 4 F
2 2.40 2.40 46.1 -0.62 -0.78 6.4 79 1 1 0 0 0 0 0  G 3 E U 4 E C 6 E C 8 E C 9 E U 10 E U 11 E A 44
E U 45 E U 46 E A 47 E U 48 E G 49 E G 50 E C 51
E A 1 F U 2 F A 4 F C 10 F U 11 F C 12 F A 14 F
3 1.60 1.59 50.0 -1.35 -0.69 15.0 78 3 0 0 0 0 1 0  C 5 E C 6 E G 7 E C 8 E C 9 E U 10 E U 11 E A 44
E U 45 E U 46 E A 1 F U 2 F C 10 F U 11 F C 12 F
A 14 F
4 1.50 1.50 52.1 -1.01 -0.55 11.8 79 6 1 1 1 1 0 0  C 18 E C 19 E G 20 E G 21 E G 22 E U 23 E G 24 E
C 30 E A 31 E G 33 E A 34 E C 36 E MG 200 E
5 1.46 2.88 57.3 -1.37 -0.75 10.9 83 4 0 2 0 0 0 0  G 12 E A 13 E G 14 E U 15 E G 16 E C 17 E C 18 E
C 19 E G 20 E G 21 E G 22 E U 23 E G 24 E A 34 E
C 36 E C 37 E C 38 E G 39 E G 40 E G 41 E U 42 E
MG 200 E MG 203 E
6 2.06 2.06 64.8 -0.54 -0.63 8.3 74 3 1 0 1 1 0 0  G 12 E A 13 E G 14 E U 15 E G 16 E C 17 E C 18 E
G 29 E C 30 E A 31 E G 33 E A 34 E U 35 E C 36 E
C 37 E C 38 E G 39 E G 40 E G 41 E U 42 E MG 203 E
7 2.08 2.08 80.0 -1.23 -0.42 14.5 79 3 2 1 1 1 0 0  C 9 E U 10 E U 11 E G 12 E A 13 E G 41 E U 42 E A
43 E A 1 F U 2 F C 10 F U 11 F C 12 F A 14 F
8 1.60 1.58 97.1 -1.43 -0.55 16.6 81 6 2 1 1 1 0 0  C 5 E C 6 E G 7 E C 8 E C 9 E U 11 E G 12 E G 41
E U 42 E A 43 E A 44 E U 45 E U 46 E A 54 E
9 2.11 2.11 97.7 -1.10 -0.54 12.9 79 4 3 1 1 1 0 0  G 3 E U 4 E C 6 E C 8 E C 9 E U 11 E G 12 E G 41
E U 42 E A 43 E A 44 E U 45 E U 46 E A 47 E U 48
E G 49 E G 50 E C 51 E A 4 F

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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