PDBsum entry 3h9c Go to PDB code:  Tunnel analysis for: 3h9c calculated with MOLE 2.0 PDB id 3h9c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   3 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.28 1.45 22.5 0.10 0.59 13.1 72 2 3 0 4 5 0 0   2 1.27 1.45 40.4 -1.03 0.06 19.2 79 7 2 1 4 3 0 0   3 1.36 1.40 15.8 -0.64 -0.38 8.5 80 2 1 3 2 2 0 0   4 1.21 1.25 17.7 -1.34 -0.19 25.0 72 1 2 1 0 3 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.