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PDBsum entry 3gmh
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Pore analysis for: 3gmh calculated with  MOLE 2.0
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PDB id
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3gmh
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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19 pores,
coloured by radius |
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17 pores,
coloured by radius
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17 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.07 |
2.07 |
30.1 |
-0.80 |
0.01 |
10.7 |
81 |
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1 |
3 |
2 |
3 |
2 |
0 |
0 |
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2 |
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2.05 |
3.17 |
31.4 |
-0.55 |
-0.07 |
9.6 |
81 |
1 |
3 |
2 |
3 |
2 |
0 |
0 |
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3 |
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1.13 |
1.32 |
38.6 |
-1.95 |
-0.65 |
22.4 |
81 |
3 |
3 |
2 |
1 |
0 |
1 |
1 |
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4 |
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1.64 |
2.65 |
42.4 |
-2.02 |
-0.52 |
22.6 |
81 |
3 |
4 |
3 |
2 |
1 |
1 |
0 |
SO4 206 L
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5 |
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2.37 |
2.60 |
48.7 |
-2.96 |
-0.75 |
37.8 |
78 |
5 |
7 |
1 |
2 |
0 |
1 |
0 |
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6 |
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1.79 |
1.96 |
73.9 |
-1.19 |
-0.36 |
21.0 |
83 |
5 |
10 |
6 |
6 |
1 |
4 |
0 |
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7 |
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1.09 |
2.53 |
74.3 |
-0.97 |
-0.34 |
16.9 |
86 |
5 |
6 |
10 |
8 |
2 |
2 |
0 |
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8 |
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1.96 |
1.96 |
84.3 |
-0.90 |
-0.22 |
16.5 |
81 |
1 |
7 |
7 |
5 |
3 |
2 |
0 |
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9 |
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2.08 |
3.02 |
104.7 |
-1.61 |
-0.36 |
21.1 |
84 |
6 |
11 |
9 |
5 |
4 |
3 |
0 |
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10 |
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2.68 |
2.67 |
116.7 |
-1.45 |
-0.46 |
17.4 |
85 |
8 |
12 |
10 |
9 |
4 |
1 |
2 |
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11 |
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2.37 |
3.21 |
126.1 |
-1.78 |
-0.57 |
20.7 |
87 |
10 |
16 |
15 |
12 |
5 |
0 |
0 |
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12 |
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2.07 |
2.07 |
128.8 |
-1.43 |
-0.33 |
20.2 |
85 |
6 |
13 |
11 |
10 |
6 |
1 |
0 |
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13 |
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1.11 |
2.01 |
137.3 |
-1.68 |
-0.39 |
23.4 |
81 |
12 |
12 |
13 |
11 |
6 |
3 |
2 |
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14 |
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2.22 |
3.13 |
144.8 |
-1.38 |
-0.43 |
16.4 |
87 |
7 |
15 |
12 |
8 |
6 |
1 |
0 |
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15 |
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1.93 |
1.92 |
148.4 |
-0.83 |
-0.33 |
16.1 |
87 |
7 |
13 |
13 |
13 |
4 |
3 |
0 |
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16 |
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2.10 |
3.03 |
169.5 |
-1.02 |
-0.29 |
15.4 |
87 |
8 |
14 |
14 |
12 |
7 |
2 |
0 |
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17 |
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2.52 |
3.76 |
184.3 |
-0.97 |
-0.34 |
15.3 |
89 |
12 |
19 |
18 |
16 |
7 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program