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PDBsum entry 3glm

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3glm calculated with MOLE 2.0 PDB id
3glm
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.27 2.27 26.1 0.19 0.23 10.2 85 3 0 1 6 2 1 0  COO 590 A
2 1.97 2.67 59.2 -1.34 -0.37 14.0 89 5 1 4 5 1 2 0  COO 590 C
3 2.29 2.29 137.1 -1.26 -0.13 15.9 83 10 2 7 8 3 3 0  COO 590 A COO 590 C
4 2.27 2.27 26.3 0.23 0.25 10.0 85 3 0 1 6 2 1 0  COO 590 B
5 1.23 1.18 196.8 -0.91 -0.09 14.5 89 12 3 12 18 2 2 0  COO 590 B COO 590 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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