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PDBsum entry 3gbh
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Tunnel analysis for: 3gbh calculated with  MOLE 2.0
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PDB id
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3gbh
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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7 tunnels,
coloured by tunnel radius |
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4 tunnels,
coloured by
tunnel radius
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4 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.17 |
3.14 |
24.6 |
-0.18 |
-0.08 |
5.3 |
82 |
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1 |
1 |
1 |
6 |
2 |
1 |
0 |
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MSE 50 B MSE 134 B
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2 |
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1.16 |
3.13 |
25.7 |
-0.18 |
0.00 |
5.5 |
79 |
1 |
1 |
1 |
6 |
3 |
1 |
0 |
MSE 50 B MSE 134 B
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3 |
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1.19 |
3.13 |
27.5 |
-0.53 |
-0.13 |
7.0 |
76 |
2 |
1 |
1 |
5 |
2 |
1 |
0 |
MSE 50 B MSE 134 B
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4 |
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1.13 |
3.09 |
28.0 |
-0.05 |
0.04 |
5.0 |
78 |
1 |
1 |
1 |
8 |
2 |
1 |
0 |
MSE 50 B MSE 134 B
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program