PDBsum entry 3ftd Go to PDB code:  Tunnel analysis for: 3ftd calculated with MOLE 2.0 PDB id 3ftd Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.32 1.33 18.2 1.12 0.24 2.5 82 0 1 2 6 0 0 0   2 1.24 1.40 27.5 0.11 -0.14 5.5 88 1 1 4 6 0 0 0   3 1.47 2.27 30.0 -0.03 -0.12 8.4 87 1 1 3 6 0 1 0   4 1.47 2.97 46.8 0.02 0.00 6.1 78 2 1 3 8 1 3 0   5 1.47 2.32 62.6 0.09 -0.11 4.8 80 2 0 5 10 2 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.