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PDBsum entry 3fsl

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3fsl calculated with MOLE 2.0 PDB id
3fsl
Pores calculated on whole structure Pores calculated excluding ligands

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14 pores, coloured by radius 15 pores, coloured by radius 15 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.83 2.19 26.1 -1.57 -0.59 21.9 82 2 5 4 3 2 0 0  
2 2.10 3.03 29.1 -0.19 -0.12 18.1 84 3 3 1 6 1 0 0  
3 1.86 2.91 29.8 -1.46 -0.39 21.9 87 2 4 2 5 0 0 0  
4 1.89 3.24 30.1 0.30 0.41 12.6 78 2 2 2 8 2 1 0  
5 1.89 3.33 31.5 0.87 0.69 10.9 78 2 2 2 9 3 1 0  
6 2.53 3.25 33.4 -0.91 -0.24 10.2 74 2 2 4 4 2 0 1  
7 3.15 3.41 42.1 -2.85 -0.80 32.9 79 2 5 3 1 1 2 0  
8 1.93 3.71 47.0 0.64 0.43 6.9 74 3 2 4 9 2 0 1  
9 1.77 3.66 66.2 -0.39 0.12 13.6 77 4 3 9 11 4 2 1  
10 2.01 2.03 77.7 -1.54 -0.30 18.8 76 6 7 9 7 2 3 1  
11 1.56 1.57 78.5 -0.75 -0.01 19.1 82 5 5 7 14 2 2 1  
12 1.27 2.07 94.0 -2.32 -0.72 23.7 82 4 10 7 4 2 3 0  
13 1.63 2.53 114.6 -1.68 -0.39 22.8 78 8 6 2 7 4 3 0  
14 1.77 2.53 158.9 -1.58 -0.37 21.7 80 8 10 5 12 4 3 1  
15 1.47 1.99 169.3 -1.05 -0.12 17.7 79 8 9 8 20 8 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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