PDBsum entry 3frm Go to PDB code:  Tunnel analysis for: 3frm calculated with MOLE 2.0 PDB id 3frm Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.26 1.45 36.8 -1.51 -0.35 20.1 68 5 1 0 3 4 0 0   2 1.25 1.45 43.3 -1.47 -0.19 16.2 67 6 2 2 2 6 1 0  SO4 254 B 3 1.24 1.40 48.1 -1.58 -0.24 21.3 73 7 2 2 4 5 0 0  MSE 231 A SO4 253 A 4 1.26 1.41 48.6 -1.54 -0.34 16.2 69 5 1 3 2 5 0 0   5 1.23 1.21 54.3 -1.36 -0.36 16.7 75 7 1 3 5 5 0 0  MSE 231 B SO4 253 B 6 1.25 1.42 63.4 -1.45 -0.11 21.5 72 6 5 2 5 9 0 0   7 1.27 1.46 65.4 -1.18 -0.09 15.9 69 7 2 4 3 7 1 0  MSE 147 B 8 1.27 1.46 68.2 -0.71 0.06 19.3 72 8 3 1 9 7 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.