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PDBsum entry 3fqk

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Pore analysis for: 3fqk calculated with MOLE 2.0 PDB id
3fqk
Pores calculated on whole structure Pores calculated excluding ligands

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11 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.57 2.15 29.1 -2.35 -0.44 27.6 83 4 3 3 3 1 0 0  
2 1.58 2.17 32.3 -0.69 -0.24 15.2 92 4 2 4 4 0 0 0  
3 1.39 1.66 40.7 -0.91 -0.14 15.9 79 5 4 3 4 3 2 1  79Z 571 B
4 2.47 4.55 40.6 -1.86 -0.44 23.3 84 5 5 3 4 0 1 2  79Z 571 A
5 3.45 4.38 49.9 -2.13 -0.55 26.9 86 9 6 5 3 1 1 0  
6 1.25 1.56 54.6 -1.31 -0.12 19.7 76 8 6 2 4 4 2 1  79Z 571 A
7 2.89 3.38 60.3 -1.99 -0.47 27.4 80 8 4 3 2 2 1 1  
8 2.10 2.38 62.0 -1.44 -0.44 21.5 80 7 4 3 4 2 1 1  
9 1.22 1.55 63.7 -1.09 -0.14 14.9 76 9 3 2 8 4 3 1  79Z 571 A
10 1.58 2.12 66.0 -1.21 -0.30 19.5 81 6 1 5 5 2 1 1  
11 2.35 4.34 65.6 -1.48 -0.38 21.3 80 7 5 3 5 2 1 2  79Z 571 B
12 2.38 4.57 67.2 -1.46 -0.42 20.6 83 8 7 6 7 2 1 2  79Z 571 B
13 2.38 4.25 70.7 -1.91 -0.44 25.1 83 11 8 6 5 2 1 2  79Z 571 B
14 1.55 2.18 74.3 -1.70 -0.37 21.4 83 9 5 7 8 2 1 2  79Z 571 B
15 1.44 1.67 79.3 -0.82 -0.15 14.4 78 7 3 4 9 5 3 1  79Z 571 B
16 1.47 1.68 80.9 -0.88 -0.20 14.8 81 8 5 7 11 5 3 1  79Z 571 B
17 1.39 1.65 84.4 -1.22 -0.21 18.1 81 11 6 7 9 5 3 1  79Z 571 B
18 1.21 1.54 85.8 -1.27 -0.35 19.9 81 9 7 7 7 4 3 2  79Z 571 A
19 1.22 1.54 88.9 -1.61 -0.33 23.1 81 11 8 7 5 4 3 2  79Z 571 A
20 1.22 1.54 94.2 -1.28 -0.29 19.5 81 10 9 7 8 4 3 3  79Z 571 A 79Z 571 B
21 1.33 1.57 98.0 -1.43 -0.32 19.7 80 13 5 6 9 4 4 2  79Z 571 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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