PDBsum entry 3fkd Go to PDB code:  Pore analysis for: 3fkd calculated with MOLE 2.0 PDB id 3fkd Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.36 1.37 29.1 -0.77 -0.25 11.8 79 4 1 2 3 3 0 0   2 1.90 1.91 54.6 -2.27 -0.56 30.2 86 3 6 4 2 0 0 0   3 1.20 1.32 60.8 -1.28 -0.37 14.8 80 5 4 2 2 2 1 0   4 1.66 1.87 73.5 -1.69 -0.46 24.0 81 4 8 4 3 2 0 0   5 1.92 2.06 106.5 -1.77 -0.33 21.9 79 9 8 6 3 5 2 0   6 1.17 1.32 132.7 -0.68 -0.04 16.5 79 9 7 6 14 4 2 0  MSE 302 D Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.