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PDBsum entry 3fbz

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3fbz calculated with MOLE 2.0 PDB id
3fbz
Pores calculated on whole structure Pores calculated excluding ligands

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0 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.35 2.35 26.2 1.49 0.89 3.1 78 0 1 3 6 5 0 0  MSE 34 B BOG 142 B MSE 34 C BOG 142 C
2 1.61 3.81 35.3 -1.27 -0.07 10.1 80 2 3 3 2 2 1 0  MSE 52 A MSE 53 A MSE 34 B BOG 141 B BOG 142 B
3 1.73 1.73 37.2 1.88 0.93 2.4 79 1 1 2 8 5 0 0  MSE 34 B BOG 142 B MSE 34 C BOG 142 C MSE 52 D
4 2.29 2.28 38.4 0.89 0.72 6.7 76 1 2 2 6 5 1 0  MSE 34 B BOG 142 B MSE 34 C BOG 142 C MSE 53 D B
OG 141 D
5 2.28 2.62 26.1 1.22 0.84 5.7 75 0 2 3 5 6 0 0  BOG 143 B BOG 143 C MSE 34 D
6 2.28 2.28 28.2 -0.84 0.12 8.8 84 1 2 4 2 2 1 0  MSE 52 C MSE 53 C BOG 141 C BOG 143 C MSE 34 D
7 1.17 1.28 32.8 -1.50 -0.48 17.6 82 3 3 4 3 2 1 0  BOG 141 A MSE 53 B
8 2.27 2.28 34.8 -1.52 -0.07 14.7 79 2 4 4 2 3 1 0  BOG 141 A MSE 52 B BOG 143 B
9 2.27 2.48 39.9 0.79 0.72 7.5 72 1 2 2 5 6 1 0  BOG 143 B MSE 53 C BOG 141 C BOG 143 C MSE 34 D
10 2.28 2.41 48.2 0.54 0.66 9.0 73 2 4 2 6 7 1 0  MSE 34 A BOG 141 A BOG 143 B BOG 143 C MSE 34 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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