PDBsum entry 3faq Go to PDB code:  Tunnel analysis for: 3faq calculated with MOLE 2.0 PDB id 3faq Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.80 1.80 15.9 -0.11 -0.20 8.3 85 2 1 2 4 0 0 0   2 1.71 1.79 16.6 -0.01 -0.20 9.1 83 2 1 2 3 0 0 0   3 1.29 1.44 27.2 -0.28 -0.29 10.4 80 3 1 2 4 1 0 0   4 1.29 1.36 27.9 -0.10 -0.28 9.6 78 3 1 2 3 1 0 0   5 1.31 1.38 19.2 -0.48 -0.17 14.6 80 1 2 2 2 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.