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PDBsum entry 3f6c

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3f6c calculated with MOLE 2.0 PDB id
3f6c
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.20 1.20 20.5 0.63 -0.05 3.2 95 1 0 1 5 0 1 0  
2 1.20 1.20 23.3 0.19 -0.10 9.8 94 2 2 2 5 0 0 0  
3 1.26 1.29 25.0 0.13 0.23 13.5 89 3 2 1 4 1 0 0  
4 1.28 1.30 28.0 -0.16 0.25 15.9 82 3 1 1 4 3 0 0  
5 1.26 1.30 28.4 -0.24 0.26 11.8 84 3 2 1 5 3 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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