PDBsum entry 3f5c Go to PDB code:  Tunnel analysis for: 3f5c calculated with MOLE 2.0 PDB id 3f5c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.31 1.33 16.6 1.78 0.49 6.6 77 0 1 0 5 0 1 0   2 1.31 1.31 16.7 1.71 0.39 7.3 81 0 1 0 4 0 1 0   3 1.31 1.35 18.4 2.06 0.58 1.1 74 0 0 0 6 0 3 0   4 1.31 2.81 24.2 0.05 0.08 10.3 78 1 2 4 4 0 0 0   5 1.33 2.92 30.0 -0.01 -0.04 8.6 78 1 1 4 6 0 1 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.