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PDBsum entry 3f3v

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3f3v calculated with MOLE 2.0 PDB id
3f3v
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.12 2.25 40.8 -0.45 -0.15 8.7 75 1 2 4 1 2 0 1  1BU 1 B
2 2.44 2.67 41.7 -1.98 -0.67 22.1 80 2 7 3 1 1 1 0  
3 2.12 2.25 49.1 -0.71 -0.32 3.7 73 0 1 6 1 4 1 1  
4 1.30 1.30 122.8 -0.90 -0.27 14.4 77 5 10 8 7 5 3 1  1BU 1 B
5 1.27 1.26 29.5 0.23 -0.08 10.1 77 2 1 1 6 1 0 0  1BU 1 A
6 1.27 1.27 39.9 -0.04 -0.11 13.6 75 3 2 2 6 2 0 1  1BU 1 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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