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PDBsum entry 3f3v
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Tunnel analysis for: 3f3v calculated with  MOLE 2.0
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PDB id
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3f3v
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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4 tunnels,
coloured by tunnel radius |
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6 tunnels,
coloured by
tunnel radius
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6 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.27 |
1.50 |
18.5 |
-0.54 |
-0.48 |
9.6 |
85 |
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1 |
2 |
2 |
1 |
2 |
1 |
0 |
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2 |
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1.26 |
1.26 |
16.0 |
-0.53 |
-0.37 |
10.9 |
82 |
1 |
0 |
1 |
3 |
0 |
0 |
0 |
1BU 1 A
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3 |
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1.76 |
1.95 |
24.5 |
1.12 |
0.27 |
6.6 |
73 |
1 |
1 |
0 |
6 |
2 |
0 |
0 |
1BU 1 A
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4 |
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1.56 |
1.66 |
16.6 |
1.15 |
0.22 |
2.3 |
72 |
1 |
0 |
0 |
6 |
2 |
1 |
0 |
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5 |
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1.32 |
1.33 |
17.0 |
-0.27 |
-0.14 |
10.7 |
70 |
2 |
1 |
0 |
2 |
2 |
1 |
0 |
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6 |
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1.17 |
1.17 |
17.6 |
-1.15 |
-0.52 |
8.8 |
85 |
1 |
1 |
1 |
1 |
0 |
2 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program