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PDBsum entry 3f1f

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Top Page protein dna_rna metals Protein-protein interface(s) pores links
Pore analysis for: 3f1f calculated with MOLE 2.0 PDB id
3f1f
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 32 pores, coloured by radius 32 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.84 1.84 68.6 -0.69 -0.73 6.5 80 2 0 1 0 1 0 0  A 1032 A C 1123 A C 1124 A G 1125 A A 1126 A A
1127 A C 2464 A A 2518 A U 2519 A C 2521 A U 2522
A G 2523 A G 2524 A G 2525 A G 2526 A U 2528 A A
2530 A G 2532 A A 2533 A A 2534 A G 2535 A G 2536
A U 2537 A C 2538 A C 2539 A C 2540 A A 2654 A U
2656 A A 2657 A A 2665 A C 2666 A C 2742 A A 2757
A MG 5480 A MG 5914 A MG 5915 A MG 5916 A MG 5917
A
2 2.51 2.51 89.1 -0.77 -0.70 9.9 78 7 2 0 2 0 0 0  G 1022 A U 1023 A G 1024 A U 1026 A A 1027 A A
1028 A C 1038 A G 1039 A C 1040 A C 1041 A G 1117
A C 1118 A C 1119 A G 1120 A C 1121 A G 1122 A C
1123 A C 1124 A G 1125 A A 1126 A A 1127 A A 2741
A C 2742 A A 2757 A G 87 B G 89 B i:A C 91 B G 92
B
3 2.16 2.19 109.4 -0.65 -0.74 6.3 78 3 2 1 1 0 1 0  G 920 A C 949 A G 950 A C 961 A C 967 A G 968 A C
985 A C 986 A G 1022 A U 1023 A U 1026 A C 1123 A
C 1124 A A 1127 A A 1128 A A 1129 A U 1133 A G
2027 A U 2028 A G 2029 A U 2457 A G 2489 A A 2541
A A 2741 A C 2742 A A 2757 A MG 5454 A G 81 B G
82 B G 83 B C 84 B G 85 B G 86 B G 87 B C 88 B G
89 B i:A U 95 B MG 6049 B
4 2.12 2.11 110.8 -0.98 -0.70 13.3 82 8 4 1 3 0 0 0  G 852 A G 853 A G 854 A G 919 A C 1038 A G 1039 A
C 1040 A C 1041 A G 1117 A C 1118 A C 1119 A U 74
B G 75 B G 76 B A 78 B G 81 B G 82 B G 92 B C 93
B C 94 B U 95 B G 96 B G 97 B G 98 B
5 1.17 1.17 130.1 -0.53 -0.42 12.7 81 7 4 1 9 0 3 0  A 1032 A C 1040 A C 1041 A G 1063 A C 1064 A U
1066 A G 1068 A A 1069 A A 1070 A C 1072 A G 1074
A C 1075 A C 1076 A G 1089 A U 1090 A G 1091 A G
1115 A C 1116 A G 1117 A G 2468 A A 2469 A A 2476
A MG 5472 A MG 5892 A MG 5893 A
6 1.85 1.85 148.2 -0.61 -0.73 6.4 68 3 2 0 2 0 1 0  C 20 A A 21 A G 530 A G 533 A U 534 A C 535 A G
551 A G 552 A U 553 A U 554 A G 556 A U 557 A G
558 A G 559 A C 560 A G 561 A G 920 A G 950 A C
967 A G 968 A G 978 A G 979 A A 980 A A 981 A C
985 A C 986 A G 1003 A C 1004 A C 1008 A G 1025 A
U 1026 A C 1135 A G 1136 A C 1218 A G 1219 A A
1220 A G 1232 A C 2021 A G 2037 A G 2038 A MG
5293 A MG 5294 A G 81 B G 82 B G 83 B C 84 B G 85
B G 86 B G 87 B U 95 B MG 6049 B
7 2.02 2.02 152.7 -0.61 -0.70 8.2 75 6 1 0 3 0 0 0  C 20 A A 21 A G 530 A G 533 A U 534 A C 535 A G
551 A G 552 A U 553 A U 554 A G 556 A U 557 A G
558 A G 559 A C 560 A G 561 A G 978 A G 979 A A
980 A A 981 A G 1002 A G 1003 A C 1004 A C 1008 A
G 1025 A C 1038 A G 1039 A C 1040 A C 1041 A G
1117 A C 1118 A C 1119 A C 1135 A G 1136 A G 1144
A C 1145 A C 1146 A C 1147 A A 1148 A C 1218 A G
1219 A A 1220 A G 1232 A C 2021 A G 2037 A G 2038
A MG 5293 A MG 5294 A C 84 B G 85 B G 86 B G 92 B
C 93 B
8 1.22 1.22 155.4 -0.46 -0.55 8.6 81 7 1 1 8 0 2 0  G 1022 A U 1023 A A 1027 A A 1028 A G 1031 A A
1032 A G 1063 A C 1064 A U 1066 A G 1068 A A 1069
A A 1070 A C 1072 A G 1074 A C 1075 A C 1076 A G
1089 A U 1090 A G 1091 A C 1116 A G 1117 A C 1118
A C 1119 A G 1120 A C 1121 A G 1122 A C 1123 A C
1124 A G 1125 A A 1126 A A 1127 A G 2468 A A 2469
A A 2476 A A 2741 A C 2742 A A 2757 A MG 5464 A
MG 5465 A MG 5472 A MG 5892 A MG 5893 A
9 1.29 1.29 175.8 -0.96 -0.58 12.7 79 9 4 2 3 2 2 0  C 902 A C 903 A C 904 A U 905 A G 906 A C 1040 A
C 1041 A C 1116 A G 1117 A C 2317 A G 2318 A G
2319 A MG 5428 A MG 5429 A C 3 B C 4 B C 5 B C 6
B G 7 B U 8 B A 13 B G 16 B C 17 B G 23 B G 24 B
A 25 B A 26 B C 27 B C 28 B A 59 B C 60 B G 61 B
C 68 B G 69 B G 116 B G 117 B G 118 B
10 2.50 2.50 192.8 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  A 1032 A C 1123 A C 1124 A G 1125 A A 1126 A A
1127 A G 1839 A G 1840 A G 1903 A G 1904 A C 1905
A G 1906 A G 1907 A C 1908 A C 1909 A U 1917 A A
1918 A A 1919 A A 1927 A G 1930 A U 1931 A U 1963
A G 1964 A A 1966 A G 1968 A U 2076 A G 2253 A C
2254 A G 2255 A A 2435 A G 2436 A U 2462 A C 2463
A C 2464 A U 2492 A U 2493 A G 2494 A A 2518 A U
2519 A C 2520 A C 2538 A C 2539 A C 2540 A U 2555
A C 2556 A G 2557 A G 2567 A C 2568 A G 2569 A U
2593 A C 2594 A G 2595 A U 2596 A G 2597 A C 2601
A A 2602 A G 2603 A C 2742 A A 2757 A MG 5480 A
MG 5724 A MG 5734 A MG 5744 A MG 5914 A MG 5938 A
MG 5939 A
11 1.61 3.16 191.3 -0.49 -0.57 8.9 76 7 2 1 7 1 0 0  G 530 A G 533 A U 534 A C 535 A A 536 A C 537 A G
539 A G 540 A C 541 A G 549 A G 550 A G 551 A G
552 A U 553 A U 554 A G 556 A U 557 A G 558 A G
559 A C 560 A G 561 A C 949 A C 961 A G 978 A G
979 A A 980 A A 981 A C 985 A G 1003 A C 1004 A C
1008 A G 1022 A U 1023 A G 1025 A U 1026 A A 1032
A C 1123 A C 1124 A A 1127 A A 1128 A A 1129 A U
1133 A C 1135 A G 1136 A C 2021 A G 2027 A U 2028
A G 2029 A G 2037 A G 2038 A U 2457 A G 2489 A A
2541 A A 2741 A C 2742 A A 2757 A MG 5293 A MG
5294 A MG 5300 A MG 5454 A G 86 B G 87 B C 88 B G
89 B i:A MG 6049 B
12 1.30 1.30 228.0 -0.45 -0.59 7.8 80 8 1 1 9 0 2 0  C 20 A A 21 A G 530 A G 533 A U 534 A C 535 A G
551 A G 552 A U 553 A U 554 A G 556 A U 557 A G
558 A G 559 A C 560 A G 561 A G 978 A G 979 A A
980 A A 981 A G 1003 A C 1004 A C 1008 A G 1025 A
A 1028 A G 1031 A A 1032 A G 1063 A C 1064 A U
1066 A G 1068 A A 1069 A A 1070 A C 1072 A G 1074
A C 1075 A C 1076 A G 1089 A U 1090 A G 1091 A C
1116 A G 1117 A C 1118 A C 1119 A G 1120 A C 1121
A G 1122 A C 1123 A C 1135 A G 1136 A G 1144 A C
1145 A C 1146 A C 1218 A G 1219 A A 1220 A G 1232
A C 2021 A G 2037 A G 2038 A G 2468 A A 2469 A A
2476 A MG 5293 A MG 5294 A MG 5464 A MG 5465 A MG
5471 A MG 5472 A MG 5892 A MG 5893 A G 86 B G 87 B
13 1.37 1.37 231.0 -0.58 -0.73 6.1 76 4 2 1 1 1 2 0  C 850 A U 851 A G 852 A G 853 A G 854 A G 855 A C
856 A C 857 A U 858 A G 859 A C 914 A C 915 A G
916 A A 917 A A 918 A G 919 A G 920 A G 921 A U
922 A C 949 A G 950 A C 961 A C 967 A G 968 A C
985 A C 986 A G 1022 A U 1023 A U 1026 A C 1123 A
C 1124 A A 1127 A A 1128 A A 1129 A U 1133 A G
2027 A U 2028 A G 2029 A G 2319 A A 2320 A U 2457
A G 2489 A A 2541 A A 2741 A C 2742 A A 2757 A MG
5407 A MG 5408 A MG 5436 A MG 5437 A MG 5454 A C
3 B C 4 B C 5 B C 6 B G 7 B U 8 B A 13 B G 16 B C
17 B G 23 B G 24 B A 25 B A 26 B C 27 B C 28 B A
59 B C 60 B G 61 B G 82 B G 83 B C 84 B G 85 B G
86 B G 87 B C 88 B G 89 B i:A G 116 B G 117 B G
118 B MG 6049 B
14 1.28 1.28 237.8 -0.91 -0.53 13.5 82 14 3 3 11 2 3 0  A 1032 A U 1033 A G 1034 A G 1036 A G 1037 A C
1038 A G 1063 A C 1064 A U 1066 A G 1068 A A 1069
A A 1070 A C 1072 A G 1074 A C 1075 A C 1076 A G
1089 A U 1090 A G 1091 A A 1111 A G 1112 A U 1113
A G 1114 A G 1115 A C 1116 A G 1117 A C 1118 A C
1119 A G 2468 A A 2469 A A 2476 A C 2527 A A 2530
A G 2532 A A 2654 A U 2656 A A 2657 A A 2665 A C
2666 A G 2744 A U 2746 A G 2747 A A 2748 A G 2751
A C 2752 A A 2753 A U 2754 A MG 5465 A MG 5467 A
MG 5468 A MG 5471 A MG 5472 A MG 5478 A MG 5479 A
MG 5892 A MG 5893 A MG 5985 A MG 5986 A
15 2.44 2.44 244.7 -0.71 -0.70 9.9 76 7 4 0 4 1 0 0  U 958 A A 959 A A 1028 A A 1029 A C 1038 A G 1039
A C 1040 A C 1041 A G 1117 A C 1118 A C 1119 A G
1120 A G 1839 A G 1840 A G 1903 A G 1904 A C 1905
A G 1906 A G 1907 A C 1908 A C 1909 A U 1917 A A
1918 A A 1919 A A 1927 A G 1930 A U 1931 A U 1963
A G 1964 A A 1966 A G 1968 A U 2076 A G 2252 A G
2253 A C 2254 A G 2255 A A 2435 A G 2436 A A 2459
A U 2460 A C 2461 A C 2483 A G 2484 A G 2485 A G
2486 A G 2487 A U 2493 A G 2494 A U 2593 A C 2594
A G 2595 A U 2596 A G 2597 A C 2601 A A 2602 A G
2603 A MG 5724 A MG 5734 A MG 5744 A MG 5887 A MG
5888 A MG 5896 A MG 5897 A MG 5898 A MG 5899 A MG
5900 A MG 5901 A MG 5938 A MG 5939 A G 89 B i:A C
91 B G 92 B MG 5052 Q
16 2.25 2.34 254.3 -0.63 -0.76 6.3 77 5 2 0 1 1 0 0  U 851 A G 852 A G 853 A G 854 A G 855 A C 856 A C
857 A U 858 A G 859 A C 867 A U 868 A G 869 A U
913 A C 914 A C 915 A G 916 A A 917 A A 918 A G
919 A G 920 A G 921 A G 1839 A G 1840 A G 1903 A
G 1904 A C 1905 A G 1906 A G 1907 A C 1908 A C
1909 A U 1917 A A 1918 A A 1919 A A 1927 A G 1930
A U 1931 A U 1963 A G 1964 A A 1966 A G 1968 A U
2076 A G 2246 A C 2254 A G 2255 A G 2256 A U 2257
A C 2258 A A 2278 A G 2279 A G 2280 A C 2281 A G
2321 A A 2322 A A 2328 A G 2329 A G 2330 A G 2331
A U 2332 A U 2423 A A 2425 A A 2426 A A 2435 A G
2436 A U 2437 A U 2593 A C 2594 A G 2595 A U 2596
A G 2597 A MG 5408 A MG 5437 A MG 5724 A MG 5734
A MG 5744 A MG 5842 A MG 5846 A MG 5849 A G 81 B
G 82 B U 95 B
17 2.05 2.05 246.7 -0.49 -0.79 4.4 83 1 0 0 0 0 0 0  A 1032 A C 1123 A C 1124 A G 1125 A A 1126 A A
1127 A G 1840 A U 1841 A G 1842 A C 1843 A C 1844
A G 1845 A G 1846 A A 1847 A A 1848 A G 1849 A G
1860 A C 1887 A G 1888 A A 1889 A A 1890 A G 1891
A C 1892 A C 1893 A C 1894 A U 2076 A U 2099 A G
2100 A G 2101 A U 2102 A C 2103 A G 2104 A C 2178
A C 2179 A U 2180 A G 2181 A G 2182 A C 2183 A G
2191 A G 2192 A G 2193 A G 2253 A C 2254 A G 2255
A A 2435 A G 2436 A U 2462 A C 2463 A C 2464 A U
2492 A U 2493 A G 2494 A A 2518 A U 2519 A C 2520
A C 2538 A C 2539 A C 2540 A U 2555 A C 2556 A G
2557 A G 2567 A C 2568 A G 2569 A C 2594 A G 2595
A U 2596 A G 2597 A C 2601 A A 2602 A G 2603 A C
2742 A A 2757 A MG 5480 A MG 5711 A MG 5712 A MG
5723 A MG 5777 A MG 5797 A MG 5914 A MG 5938 A MG
5939 A
18 2.36 2.34 253.2 -0.80 -0.71 10.8 76 8 5 0 4 1 0 0  C 376 A C 377 A C 378 A U 958 A A 959 A A 1028 A
A 1029 A C 1038 A G 1039 A C 1040 A C 1041 A G
1117 A C 1118 A C 1119 A G 1120 A G 1840 A U 1841
A G 1842 A A 1853 A A 1854 A G 1855 A G 1856 A G
1857 A G 1858 A C 1880 A C 1881 A C 1882 A G 1883
A C 1892 A C 1893 A U 2076 A C 2078 A U 2079 A G
2080 A G 2235 A C 2236 A G 2237 A G 2252 A G 2253
A C 2254 A G 2255 A A 2435 A G 2436 A A 2459 A U
2460 A C 2461 A C 2483 A G 2485 A G 2486 A G 2487
A U 2493 A G 2494 A C 2594 A G 2595 A U 2596 A G
2597 A C 2601 A A 2602 A G 2603 A MG 5711 A MG
5716 A MG 5723 A MG 5777 A MG 5816 A MG 5887 A MG
5888 A MG 5896 A MG 5897 A MG 5898 A MG 5899 A MG
5900 A MG 5901 A MG 5938 A MG 5939 A G 89 B i:A C
91 B G 92 B MG 5052 Q
19 2.14 2.14 255.0 -0.32 -0.69 5.2 85 2 3 1 4 0 1 0  MG 5095 8 C 40 A C 184 A U 185 A G 186 A G 187 A
A 204 A G 205 A U 206 A G 219 A U 235 A C 236 A C
237 A C 238 A U 239 A G 254 A A 255 A C 268 A U
269 A A 270 A i:A G 270 A i:U C 270 A i:V G 270 A
i:W G 270 A i:X G 270 A i:Y G 270 A i:Z C 273 A i:
C A 276 A C 277 A A 359 A G 360 A G 361 A U 362 A
G 382 A U 383 A C 393 A A 394 A U 395 A G 424 A G
425 A C 426 A C 433 A A 590 A C 591 A G 592 A G
593 A U 594 A C 595 A G 596 A U 597 A A 608 A A
609 A i:A A 655 A G 656 A U 657 A C 658 A C 659 A
G 660 A G 836 A C 837 A C 850 A G 920 A G 921 A U
922 A C 935 A C 936 A U 937 A C 967 A G 968 A A
2269 A G 2270 A U 2357 A C 2359 A MG 5109 A MG
5176 A MG 5180 A MG 5185 A MG 5212 A MG 5243 A MG
5324 A MG 5436 A G 81 B G 82 B U 95 B
20 1.50 1.50 280.7 -0.49 -0.71 4.8 71 4 0 0 1 2 1 0  C 867 A U 868 A G 869 A U 913 A C 914 A C 915 A G
1839 A G 1840 A G 1903 A G 1904 A C 1905 A G 1906
A G 1907 A C 1908 A C 1909 A U 1917 A A 1918 A A
1919 A A 1927 A G 1930 A U 1931 A U 1963 A G 1964
A A 1966 A G 1968 A U 2076 A G 2246 A C 2254 A G
2255 A G 2256 A U 2257 A C 2258 A A 2278 A G 2279
A G 2280 A C 2281 A G 2319 A A 2320 A G 2321 A A
2322 A A 2328 A G 2329 A G 2330 A G 2331 A U 2332
A U 2423 A A 2425 A A 2426 A A 2435 A G 2436 A U
2437 A U 2593 A C 2594 A G 2595 A U 2596 A G 2597
A MG 5724 A MG 5734 A MG 5744 A MG 5842 A MG 5846
A MG 5849 A C 3 B C 4 B C 5 B C 6 B G 7 B U 8 B A
13 B G 16 B C 17 B G 23 B G 24 B A 25 B A 26 B C
27 B C 28 B A 59 B C 60 B G 61 B G 116 B G 117 B
G 118 B
21 1.57 2.47 284.5 -0.33 -0.55 7.0 82 6 4 1 13 0 5 0  U 851 A G 852 A G 853 A G 854 A G 855 A C 856 A C
857 A U 858 A G 859 A A 866 A C 867 A U 868 A G
869 A A 870 A U 871 A C 898 A A 899 A A 900 A A
901 A C 902 A C 903 A C 914 A C 915 A G 916 A A
917 A A 918 A G 919 A G 920 A G 921 A A 1067 A G
1068 A A 1069 A A 1073 A G 1074 A A 1095 A G 2299
A G 2318 A G 2319 A A 2320 A G 2321 A G 2470 A C
2471 A G 2472 A U 2473 A C 2474 A G 2482 A C 2483
A G 2484 A A 2660 A MG 5408 A MG 5895 A A 13 B G
69 B C 70 B G 81 B G 82 B U 95 B
22 1.45 1.45 293.1 -0.16 -0.50 5.4 80 4 2 1 13 1 6 0  A 866 A C 867 A U 868 A G 869 A A 870 A U 871 A C
898 A A 899 A A 900 A A 901 A C 902 A C 903 A A
1067 A G 1068 A A 1069 A A 1073 A G 1074 A A 1095
A G 2299 A G 2318 A G 2319 A A 2320 A G 2321 A G
2470 A C 2471 A G 2472 A U 2473 A C 2474 A G 2482
A C 2483 A G 2484 A MG 5895 A C 3 B C 4 B C 5 B C
6 B G 7 B U 8 B A 13 B G 16 B C 17 B G 23 B G 24
B A 25 B A 26 B C 27 B C 28 B A 59 B C 60 B G 61
B G 69 B G 116 B G 117 B G 118 B
23 1.51 1.51 289.2 -0.59 -0.71 6.2 72 5 1 0 1 2 1 0  C 376 A C 377 A C 378 A C 867 A U 868 A G 869 A U
913 A C 914 A C 915 A G 1840 A U 1841 A G 1842 A
A 1853 A A 1854 A G 1855 A G 1856 A G 1857 A G
1858 A C 1880 A C 1881 A C 1882 A G 1883 A C 1892
A C 1893 A U 2076 A C 2078 A U 2079 A G 2080 A G
2235 A C 2236 A G 2237 A G 2246 A C 2254 A G 2255
A G 2256 A U 2257 A C 2258 A A 2278 A G 2279 A G
2280 A C 2281 A G 2319 A A 2320 A G 2321 A A 2322
A A 2328 A G 2329 A G 2330 A G 2331 A U 2332 A U
2423 A A 2425 A A 2426 A A 2435 A G 2436 A U 2437
A G 2595 A U 2596 A G 2597 A MG 5711 A MG 5716 A
MG 5723 A MG 5777 A MG 5842 A MG 5846 A MG 5849 A
C 3 B C 4 B C 5 B C 6 B G 7 B U 8 B A 13 B G 16 B
C 17 B G 23 B G 24 B A 25 B A 26 B C 27 B C 28 B
A 59 B C 60 B G 61 B G 116 B G 117 B G 118 B
24 2.28 2.28 298.5 -0.74 -0.71 9.9 76 7 4 0 4 1 0 0  U 958 A A 959 A A 1028 A A 1029 A C 1038 A G 1039
A C 1040 A C 1041 A G 1117 A C 1118 A C 1119 A G
1120 A G 1840 A U 1841 A G 1842 A C 1843 A C 1844
A G 1845 A G 1846 A A 1847 A A 1848 A G 1849 A G
1860 A C 1887 A G 1888 A A 1889 A A 1890 A G 1891
A C 1892 A C 1893 A C 1894 A U 2076 A U 2099 A G
2100 A G 2101 A U 2102 A C 2103 A G 2104 A C 2178
A C 2179 A U 2180 A G 2181 A G 2182 A C 2183 A G
2191 A G 2192 A G 2193 A G 2252 A G 2253 A C 2254
A G 2255 A A 2435 A G 2436 A A 2459 A U 2460 A C
2461 A C 2483 A G 2485 A G 2486 A G 2487 A U 2493
A G 2494 A C 2594 A G 2595 A U 2596 A G 2597 A C
2601 A A 2602 A G 2603 A MG 5711 A MG 5712 A MG
5723 A MG 5777 A MG 5797 A MG 5887 A MG 5888 A MG
5896 A MG 5897 A MG 5898 A MG 5899 A MG 5900 A MG
5901 A MG 5938 A MG 5939 A G 89 B i:A C 91 B G 92
B MG 5052 Q
25 2.40 2.40 294.1 -0.86 -0.73 10.1 80 10 6 1 3 1 1 0  MG 5095 8 A 38 A C 39 A C 40 A G 54 A G 55 A A 56
A C 57 A C 66 A U 67 A C 128 A A 181 A A 182 A C
183 A C 238 A U 239 A C 433 A U 434 A C 435 A C
436 A C 451 A G 452 A G 458 A A 590 A C 591 A G
592 A G 593 A U 594 A C 595 A G 596 A U 597 A A
608 A A 609 A i:A A 655 A G 656 A U 657 A C 658 A
C 659 A G 660 A G 668 A G 696 A G 836 A C 837 A C
850 A G 920 A G 921 A U 922 A C 935 A C 936 A U
937 A C 967 A G 968 A C 1306 A A 1307 A A 1308 A
G 1346 A G 1347 A A 1379 A G 1380 A G 1381 A G
1429 A C 1430 A U 1433 A G 1555 A C 1556 A G 1559
A G 1560 A G 1561 A A 1562 A G 1563 A C 1564 A C
1600 A G 1601 A G 1623 A A 2269 A G 2270 A U 2357
A C 2359 A MG 5109 A MG 5118 A MG 5257 A MG 5324
A MG 5436 A MG 5533 A MG 5558 A MG 5609 A MG 5610
A MG 5611 A MG 5612 A G 81 B G 82 B U 95 B
26 1.49 1.49 302.4 -0.66 -0.65 7.5 74 5 1 1 2 3 1 0  C 867 A U 868 A G 869 A U 913 A C 914 A C 915 A G
2252 A G 2253 A C 2254 A G 2255 A G 2256 A U 2257
A A 2278 A G 2279 A G 2280 A G 2319 A A 2320 A G
2321 A A 2322 A A 2328 A G 2329 A G 2330 A G 2331
A U 2332 A U 2462 A C 2463 A U 2492 A U 2493 A G
2494 A C 2520 A C 2521 A U 2522 A G 2523 A G 2524
A G 2525 A G 2526 A U 2528 A A 2530 A G 2532 A A
2533 A A 2534 A G 2535 A G 2536 A U 2537 A C 2538
A U 2555 A C 2556 A G 2557 A G 2567 A C 2568 A G
2569 A A 2602 A A 2654 A U 2656 A A 2657 A A 2665
A C 2666 A MG 5842 A MG 5846 A MG 5849 A MG 5916
A MG 5917 A C 3 B C 4 B C 5 B C 6 B G 7 B U 8 B A
13 B G 16 B C 17 B G 23 B G 24 B A 25 B A 26 B C
27 B C 28 B A 59 B C 60 B G 61 B G 116 B G 117 B
G 118 B
27 1.29 1.29 322.5 -0.48 -0.61 8.3 79 7 4 1 10 1 2 0  U 958 A A 959 A A 1028 A A 1029 A G 1031 A A 1032
A G 1063 A C 1064 A U 1066 A G 1068 A A 1069 A A
1070 A C 1072 A G 1074 A C 1075 A C 1076 A G 1089
A U 1090 A G 1091 A C 1116 A G 1117 A C 1118 A C
1119 A G 1120 A C 1121 A G 1122 A G 1839 A G 1840
A G 1903 A G 1904 A C 1905 A G 1906 A G 1907 A C
1908 A C 1909 A U 1917 A A 1918 A A 1919 A A 1927
A G 1930 A U 1931 A U 1963 A G 1964 A A 1966 A G
1968 A U 2076 A G 2252 A G 2253 A C 2254 A G 2255
A A 2435 A G 2436 A A 2459 A U 2460 A C 2461 A G
2468 A A 2469 A A 2476 A C 2483 A G 2485 A G 2486
A G 2487 A U 2493 A G 2494 A U 2593 A C 2594 A G
2595 A U 2596 A G 2597 A C 2601 A A 2602 A G 2603
A MG 5465 A MG 5471 A MG 5472 A MG 5724 A MG 5734
A MG 5744 A MG 5887 A MG 5888 A MG 5892 A MG 5893
A MG 5896 A MG 5897 A MG 5898 A MG 5899 A MG 5900
A MG 5901 A MG 5938 A MG 5939 A G 89 B i:A MG
5052 Q
28 1.37 1.37 331.0 -0.54 -0.61 8.9 79 8 5 1 10 1 2 0  C 376 A C 377 A C 378 A U 958 A A 959 A A 1028 A
A 1029 A G 1031 A A 1032 A G 1063 A C 1064 A U
1066 A G 1068 A A 1069 A A 1070 A C 1072 A G 1074
A C 1075 A C 1076 A G 1089 A U 1090 A G 1091 A C
1116 A G 1117 A C 1118 A C 1119 A G 1120 A C 1121
A G 1122 A G 1840 A U 1841 A G 1842 A A 1853 A A
1854 A G 1855 A G 1856 A G 1857 A G 1858 A C 1880
A C 1881 A C 1882 A G 1883 A C 1892 A C 1893 A U
2076 A C 2078 A U 2079 A G 2080 A G 2235 A C 2236
A G 2237 A G 2252 A G 2253 A C 2254 A G 2255 A A
2435 A G 2436 A A 2459 A U 2460 A C 2461 A G 2468
A A 2469 A A 2476 A C 2483 A G 2484 A G 2485 A G
2486 A G 2487 A U 2493 A G 2494 A C 2594 A G 2595
A U 2596 A G 2597 A C 2601 A A 2602 A G 2603 A MG
5465 A MG 5471 A MG 5472 A MG 5711 A MG 5716 A MG
5723 A MG 5777 A MG 5816 A MG 5887 A MG 5888 A MG
5892 A MG 5893 A MG 5896 A MG 5897 A MG 5898 A MG
5899 A MG 5900 A MG 5901 A MG 5938 A MG 5939 A G
89 B i:A MG 5052 Q
29 2.33 2.30 323.7 -0.89 -0.61 12.5 79 18 6 0 9 2 0 0  C 57 A C 128 A A 460 A C 461 A C 462 A A 470 A G
696 A A 751 A C 790 A U 958 A A 959 A A 1028 A A
1029 A C 1038 A G 1039 A C 1040 A C 1041 A G 1117
A C 1118 A C 1119 A G 1120 A G 1259 A C 1306 A A
1307 A A 1308 A G 1311 A U 1312 A U 1323 A C 1333
A G 1334 A G 1346 A G 1347 A A 1379 A G 1380 A G
1381 A G 1429 A C 1430 A U 1433 A G 1555 A C 1556
A G 1559 A G 1560 A G 1561 A A 1562 A G 1563 A C
1564 A C 1600 A G 1601 A A 1616 A G 1623 A A 2058
A A 2059 A G 2061 A A 2062 A C 2063 A G 2251 A G
2252 A G 2253 A A 2451 A A 2459 A U 2460 A C 2461
A C 2483 A G 2484 A G 2485 A G 2486 A G 2487 A U
2493 A G 2494 A U 2506 A U 2585 A C 2586 A A 2602
A U 2609 A C 2610 A U 2611 A MG 5533 A MG 5558 A
MG 5609 A MG 5610 A MG 5611 A MG 5612 A MG 5887 A
MG 5888 A MG 5896 A MG 5897 A MG 5898 A MG 5899 A
MG 5900 A MG 5901 A G 89 B i:A C 91 B G 92 B MG
5052 Q
30 1.52 1.52 399.8 -0.75 -0.60 9.7 78 15 3 0 7 3 1 0  C 57 A C 128 A A 460 A C 461 A C 462 A A 470 A G
696 A A 751 A C 790 A C 867 A U 868 A G 869 A U
913 A C 914 A C 915 A G 1259 A C 1306 A A 1307 A
A 1308 A G 1311 A U 1312 A U 1323 A C 1333 A G
1334 A G 1346 A G 1347 A A 1379 A G 1380 A G 1381
A G 1429 A C 1430 A U 1433 A G 1555 A C 1556 A G
1559 A G 1560 A G 1561 A A 1562 A G 1563 A C 1564
A C 1600 A G 1601 A A 1616 A G 1623 A A 2058 A A
2059 A G 2061 A A 2062 A C 2063 A G 2251 A G 2252
A G 2253 A C 2254 A G 2255 A G 2256 A U 2257 A A
2278 A G 2279 A G 2280 A C 2281 A G 2319 A A 2320
A G 2321 A A 2322 A A 2328 A G 2329 A G 2330 A G
2331 A U 2332 A A 2451 A G 2494 A U 2506 A U 2585
A C 2586 A A 2602 A U 2609 A C 2610 A U 2611 A MG
5533 A MG 5534 A MG 5558 A MG 5609 A MG 5610 A MG
5611 A MG 5612 A MG 5842 A MG 5846 A MG 5849 A C
3 B C 4 B C 5 B C 6 B G 7 B U 8 B A 13 B G 16 B C
17 B G 23 B G 24 B A 25 B A 26 B C 27 B C 28 B A
59 B C 60 B G 61 B G 116 B G 117 B G 118 B
31 2.71 2.71 28.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  C 2107 A C 2108 A U 2109 A A 2119 A G 2121 A U
2122 A G 2123 A G 2124 A G 2125 A G 2151 A G 2152
A C 2164 A A 2171 A A 2173 A C 2174 A C 2175 A A
2176 A MG 5794 A
32 2.71 2.71 31.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  A 2117 A A 2119 A U 2122 A G 2123 A G 2124 A G
2125 A G 2148 A G 2149 A U 2150 A C 2161 A G 2162
A C 2164 A A 2171 A U 2172 A A 2173 A C 2174 A C
2175 A MG 5794 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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