PDBsum entry 3eyc

Pore analysis for: 3eyc calculated with

MOLE 2.0

PDB id

3eyc

Pores calculated on whole structure

Pores calculated excluding ligands

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6 pores, coloured by radius

13 pores, coloured by radius

13 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.52

3.59

37.7

1.41

0.59

8.8

82

2

1

2

16

4

0

0

BU1 1 B

2

2.22

2.30

39.7

0.23

0.16

17.8

85

5

5

2

9

1

0

0

3

1.36

1.35

45.0

0.83

0.37

12.4

78

3

2

0

14

3

0

0

BU1 1 D

4

1.54

3.62

49.0

0.59

0.35

16.3

80

4

4

1

13

3

0

0

BU1 1 B

5

1.36

1.36

78.7

-1.37

-0.43

25.7

86

6

8

2

9

0

0

0

6

1.23

2.38

80.2

-0.36

-0.19

11.7

79

4

2

4

10

1

0

0

7

1.75

3.96

79.9

-0.73

-0.15

23.1

82

5

6

2

13

2

0

0

BU1 1 D

8

2.12

2.20

87.1

-1.16

-0.24

22.2

85

11

6

7

9

1

1

0

9

1.26

1.54

95.7

0.61

0.30

7.1

78

4

0

4

19

4

0

0

BU1 1 D

10

1.86

4.03

97.1

0.30

0.07

10.7

83

6

3

5

15

3

1

0

BU1 1 C

11

1.84

4.20

108.2

-0.15

0.01

18.1

82

11

7

3

18

3

0

0

BU1 1 C

12

2.12

2.17

119.8

-1.94

-0.55

26.9

84

13

9

7

5

0

2

0

13

1.27

1.52

129.5

-1.00

-0.30

18.9

84

7

7

6

14

1

0

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.