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PDBsum entry 3ey4

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 3ey4 calculated with MOLE 2.0 PDB id
3ey4
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 11 pores, coloured by radius 11 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.98 2.06 34.8 0.71 0.19 6.4 84 1 2 2 11 3 0 0  352 603 B
2 1.25 1.52 35.4 0.90 0.26 4.6 89 2 0 1 10 2 0 0  NDP 501 A 352 601 A
3 1.54 1.66 39.6 -1.49 -0.53 16.1 82 4 4 6 3 1 0 0  
4 1.84 2.86 47.3 -0.12 0.04 10.8 85 4 2 2 8 3 0 0  NDP 501 A 352 601 A
5 1.57 1.69 57.9 -0.04 -0.01 7.3 84 4 1 6 12 4 0 0  NDP 502 B 352 603 B
6 1.23 1.24 66.0 -1.94 -0.50 27.2 89 9 7 3 6 0 1 0  NDP 504 D
7 1.18 2.24 70.5 -0.02 0.13 10.6 85 5 1 3 11 3 1 0  352 602 C
8 1.23 1.22 81.0 -1.90 -0.63 24.3 90 9 7 3 5 0 0 0  NDP 504 D
9 1.28 1.30 98.6 -1.17 -0.14 15.7 81 12 5 6 9 6 1 0  NDP 504 D 352 604 D
10 1.64 1.78 175.4 -1.98 -0.30 27.7 83 19 10 8 9 3 2 0  
11 1.58 1.54 224.2 -1.91 -0.36 26.3 83 21 14 9 10 5 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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