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PDBsum entry 3emo

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Membrane protein/cell adhesion PDB id
3emo
Contents
Protein chains
126 a.a.

References listed in PDB file
Key reference
Title Repetitive architecture of the haemophilus influenzae hia trimeric autotransporter.
Authors G.Meng, J.W.St geme, G.Waksman.
Ref. J Mol Biol, 2008, 384, 824-836. [DOI no: 10.1016/j.jmb.2008.09.085]
PubMed id 18948113
Abstract
The Hia autotransporter of Haemophilus influenzae belongs to the trimeric autotransporter subfamily and mediates bacterial adherence to the respiratory epithelium. In this report, we show that the structure of Hia is characterized by a modular architecture containing repeats of structurally distinct domains. Comparison of the structures of HiaBD1 and HiaBD2 adhesive repeats and a nonadhesive repeat (a novel fold) shed light on the structural determinants of Hia adhesive function. Examination of the structure of an extended version of the Hia translocator domain revealed the structural transition between the C-terminal translocator domain and the N-terminal passenger domain, highlighting a highly intertwined domain that is ubiquitous among trimeric autotransporters. Overall, this study provides important insights into the mechanism of Hia adhesive activity and the overall structure of trimeric autotransporters.
Figure 4.
Fig. 4. Structure comparison between Trp-ring domains. (a) Stereo ribbon diagram of the superimposed W1 (blue), W3 (green), and W5 (red) domains viewed from the side. (b) Stereo ribbon diagram of the superimposed Trp-ring domains viewed from the top. (c) Sequence alignment of the Trp-ring domains between Hia/Hsf/NhhA. In (a) and (b), the conserved residues at the trimeric interface are shown in stick representation. In (c), these residues are shown in blue.
Figure 6.
Fig. 6. Modular architecture of Hia and putative two-step adhesive mechanism. (a) Modular architecture of Hia adhesin. While the structures of IN1, W1, KG1, W3, IN2, W5, Neck, and transmembrane anchor/translocator domains are determined crystallographically, W2/W4 and KG2 are modeled based on W1/W3/W5 and KG1, respectively. Yellow rectangles represent the Hia sequences that are yet to be structurally characterized, including the predicted N-terminal GANG and C-terminal TTT domains. (b) A putative two-step adhesive mechanism utilized by Hia/Hsf-like adhesin to form an intimate association between the bacterium and the host cell. The adhesive Trp-ring domains with different binding capacities are shown in blue and red. The nonadhesive Trp-ring domains are shown in green.
The above figures are reprinted from an Open Access publication published by Elsevier: J Mol Biol (2008, 384, 824-836) copyright 2008.
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