PDBsum entry 3ei3

Pore analysis for: 3ei3 calculated with

MOLE 2.0

PDB id

3ei3

Pores calculated on whole structure

Pores calculated excluding ligands

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14 pores, coloured by radius

14 pores, coloured by radius

14 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.68

1.70

39.6

0.01

-0.22

12.1

86

2

4

2

3

1

1

0

2

2.96

2.94

41.3

-2.23

-0.52

26.7

82

5

6

4

2

1

1

1

3

3.02

3.17

47.8

-1.87

-0.51

24.5

82

5

7

4

5

1

1

1

4

1.62

1.62

57.7

-2.26

-0.46

22.9

76

10

3

5

1

4

4

0

5

2.20

2.70

67.6

-2.58

-0.70

25.1

89

3

8

6

1

1

1

0

6

1.51

2.56

70.6

-2.16

-0.46

23.9

77

10

6

3

1

3

6

0

7

1.76

2.13

76.9

-1.44

-0.41

19.4

82

10

5

5

6

4

2

1

8

1.07

2.27

84.7

-0.90

-0.16

19.3

78

5

10

5

10

4

1

0

9

1.78

2.04

105.1

-1.72

-0.41

22.9

77

12

8

5

6

6

6

1

10

2.28

5.19

112.0

-2.08

-0.50

25.5

84

13

7

9

5

2

2

0

11

1.84

2.24

140.6

-1.81

-0.47

21.1

86

17

8

11

10

3

2

0

12

1.84

2.37

154.8

-1.86

-0.44

23.2

83

18

9

9

9

4

3

1

13

1.07

2.27

189.8

-1.26

-0.33

21.2

83

13

15

11

12

3

4

1

14

2.05

2.11

213.4

-1.79

-0.38

26.2

80

25

14

13

14

5

4

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.