PDBsum entry 3ei1 Go to PDB code:  Pore analysis for: 3ei1 calculated with MOLE 2.0 PDB id 3ei1 Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   17 pores, coloured by radius 19 pores, coloured by radius 19 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.18 1.41 29.5 0.26 -0.20 5.3 90 1 1 2 5 0 1 0   2 1.65 1.85 29.8 -1.03 -0.08 10.9 73 3 2 3 3 4 1 0   3 3.01 3.01 32.1 -2.59 -0.69 12.5 80 1 4 7 1 1 1 0   4 1.99 1.99 36.7 -1.75 -0.58 10.0 83 1 2 6 1 1 1 0   5 1.27 1.74 44.8 -0.27 -0.36 10.6 83 0 4 3 5 1 1 0   6 1.19 1.40 52.5 -1.14 -0.38 8.3 87 1 3 9 6 1 2 0   7 1.47 1.62 53.2 -0.63 -0.30 13.9 80 3 2 1 6 1 1 0   8 2.24 2.24 53.7 -1.88 -0.65 22.4 86 5 6 6 4 0 0 1   9 1.79 2.01 55.3 -1.97 -0.46 20.8 80 8 4 3 2 2 5 0  5PY 8 G DG 9 G 10 2.93 3.59 58.6 -1.99 -0.57 21.4 86 5 6 8 5 0 1 1   11 1.21 1.42 62.7 -1.11 -0.32 19.0 87 4 5 4 9 1 2 1   12 2.04 2.09 67.6 -1.79 -0.51 19.3 83 10 6 6 4 1 2 0   13 2.02 2.09 74.6 -1.24 -0.50 13.3 86 8 6 8 6 3 1 0   14 2.13 2.16 75.7 -1.18 -0.39 18.8 85 9 6 5 8 3 1 1   15 1.92 2.11 99.7 -2.00 -0.50 21.9 82 17 8 6 6 1 7 0  5PY 8 G DG 9 G 16 1.68 1.71 102.1 -1.65 -0.25 22.4 80 9 5 11 9 4 2 0   17 1.79 1.94 106.7 -1.61 -0.50 17.6 84 15 8 8 7 3 6 0  5PY 8 G DG 9 G 18 1.41 1.73 134.8 -1.58 -0.31 20.9 79 9 9 12 10 5 3 0   19 1.10 1.55 151.6 -1.69 -0.38 21.0 84 22 8 11 10 4 6 0  5PY 8 G DG 9 G Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.