PDBsum entry 3eee Go to PDB code:  Tunnel analysis for: 3eee calculated with MOLE 2.0 PDB id 3eee Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   10 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.06 2.43 18.6 1.57 0.70 6.3 78 1 0 0 5 2 0 0   2 1.05 2.39 18.8 1.80 0.77 5.6 75 1 0 0 5 3 0 0   3 1.10 2.43 19.0 1.22 0.77 10.1 82 2 1 0 6 1 0 0   4 1.07 2.44 19.2 1.41 0.80 9.3 79 2 1 0 6 2 0 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.