PDBsum entry 3ee7

Pore analysis for: 3ee7 calculated with

MOLE 2.0

PDB id

3ee7

Pores calculated on whole structure

Pores calculated excluding ligands

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without HETATM:

4 pores, coloured by radius

6 pores, coloured by radius

6 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.39

1.37

25.9

-1.16

-0.31

12.7

75

2

0

3

4

1

0

0

2

1.55

1.55

46.6

-0.07

-0.20

11.0

75

2

1

1

6

1

1

1

GOL 129 D

3

1.18

1.18

127.1

-0.18

-0.22

9.7

83

4

2

9

13

3

1

1

GOL 125 A

4

1.58

3.04

129.1

-0.43

-0.32

9.2

80

2

2

7

10

2

2

1

GOL 125 A PO4 122 C

5

1.60

1.80

50.9

-0.02

-0.29

11.1

85

1

3

2

8

1

0

0

PO4 122 D

6

1.63

1.79

89.4

-0.01

-0.21

11.1

85

2

3

6

8

1

1

1

PO4 122 D GOL 128 D

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.