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PDBsum entry 3ec7

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 3ec7 calculated with MOLE 2.0 PDB id
3ec7
Pores calculated on whole structure Pores calculated excluding ligands

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17 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.89 4.75 42.0 -2.05 -0.65 21.0 91 2 6 5 4 1 0 0  
2 1.11 3.14 43.4 -1.56 -0.19 24.9 83 6 4 3 4 2 0 0  MSE 12 G NAD 400 G
3 1.53 1.54 61.8 -0.37 -0.13 4.9 84 2 2 6 4 4 0 0  
4 2.95 5.68 77.5 -2.19 -0.51 26.4 88 6 10 8 9 0 0 0  
5 2.95 5.69 92.3 -2.24 -0.58 21.9 88 6 9 11 10 1 0 0  
6 1.16 1.65 113.1 -1.46 -0.40 15.7 83 6 10 11 9 6 1 0  MSE 12 E NAD 400 E EPE 401 E

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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