PDBsum entry 3e8e Go to PDB code:  Pore analysis for: 3e8e calculated with MOLE 2.0 PDB id 3e8e Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   22 pores, coloured by radius 27 pores, coloured by radius 27 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.73 2.69 25.6 -1.94 0.01 26.4 67 3 3 2 2 2 1 0   2 4.97 6.94 25.8 -2.48 -0.43 36.8 85 5 4 3 2 0 0 0   3 1.38 1.42 27.7 -2.15 -0.30 38.9 78 4 6 0 3 0 0 0   4 1.61 1.61 35.7 -1.96 -0.63 24.9 86 4 3 5 2 0 0 0   5 1.61 1.61 35.9 -1.82 -0.44 30.9 80 7 5 2 3 0 0 0   6 1.25 1.25 38.9 -0.90 -0.05 19.9 72 5 4 2 3 2 0 0   7 1.38 1.42 40.8 -1.75 -0.60 26.1 78 4 5 2 3 0 0 0   8 1.65 1.74 47.2 -2.09 -0.60 25.9 78 7 5 4 4 1 0 0   9 2.61 3.36 49.7 -1.65 -0.32 24.8 82 7 3 6 6 0 0 0   10 2.22 2.38 53.1 -1.80 -0.28 31.6 79 7 5 4 6 1 0 0   11 1.80 3.13 53.7 -1.63 -0.11 30.6 71 9 8 1 4 2 0 0   12 1.75 3.07 61.0 -1.63 -0.15 29.2 75 8 7 4 4 2 0 0   13 2.92 4.26 64.9 -2.00 -0.34 27.1 85 8 6 6 4 0 0 0   14 1.89 1.97 64.9 -2.06 -0.58 21.9 85 7 3 7 4 0 0 0   15 1.94 3.52 65.6 -2.08 -0.55 28.7 82 7 5 5 5 0 1 0   16 1.26 1.27 71.3 -2.62 -0.73 29.2 84 7 5 7 1 0 1 0   17 1.64 1.73 79.9 -2.14 -0.63 20.9 82 9 5 7 3 1 0 0   18 1.69 1.66 86.8 -2.28 -0.43 29.2 80 7 5 4 5 3 0 0   19 1.85 1.97 97.5 -2.08 -0.59 18.3 87 9 3 11 3 0 0 0   20 1.66 1.75 113.6 -2.04 -0.50 25.0 83 13 10 9 6 1 0 0   21 1.11 1.38 128.6 -0.99 -0.21 18.5 76 10 8 3 9 3 1 0  G98 351 B 22 1.84 1.96 131.2 -2.03 -0.50 22.7 87 13 8 12 6 0 0 0   23 1.17 1.40 139.4 -1.61 -0.44 24.8 82 13 8 6 10 1 1 0  G98 351 B 24 1.23 1.28 140.1 -1.95 -0.51 23.3 77 10 8 5 3 3 3 0   25 1.29 1.39 141.5 -1.59 -0.30 19.5 73 8 8 5 3 5 3 0   26 1.14 1.43 29.8 0.39 -0.06 10.1 80 3 3 1 6 1 0 0  G98 351 L 27 1.20 1.45 35.8 -0.81 -0.33 15.5 81 4 3 2 6 2 0 0  G98 351 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.