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PDBsum entry 3e6f

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Top Page protein ligands Protein-protein interface(s) tunnels links
Tunnel analysis for: 3e6f calculated with MOLE 2.0 PDB id
3e6f
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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8 tunnels, coloured by tunnel radius 8 tunnels, coloured by tunnel radius 8 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.37 1.45 15.6 -0.37 -0.05 11.8 87 2 0 2 2 1 0 0  
2 1.88 2.13 16.6 -0.17 -0.01 9.2 89 1 0 0 4 0 1 0  
3 1.88 2.13 17.4 -0.30 0.07 13.6 92 3 0 1 4 0 1 0  
4 1.90 2.19 17.4 0.19 0.09 8.2 80 1 0 0 4 2 1 0  
5 1.90 2.19 18.2 0.09 0.16 12.0 85 3 0 1 4 2 1 0  
6 1.49 1.78 19.7 -0.70 0.12 10.1 79 2 2 3 1 4 0 0  
7 1.49 1.78 22.9 -0.36 0.07 8.5 82 2 2 3 2 4 0 0  
8 1.49 1.79 36.0 -0.30 -0.11 5.6 78 1 1 3 2 5 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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