PDBsum entry 3e5e Go to PDB code:  Tunnel analysis for: 3e5e calculated with MOLE 2.0 PDB id 3e5e Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in list below Tunnels Length Hydropathy Hydrophobicity Polarity Mutability Residue..type Ligands Radius 1 1.36 15.0 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  15 G A,28 G A,31 G A,32 C A,33 C A,34 U A,35 U A 2 2.23 16.1 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  9 A A,10 A A,11 G A,26 C A,27 A A,28 G A,31 G A, 33 C A,34 U A,35 U A,202 SR A 3 1.56 16.7 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  31 G A,33 C A,34 U A,35 U A,36 G A,47 G A,207 SR A 4 2.20 16.9 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  6 C A,7 G A,9 A A,10 A A,11 G A,26 C A,27 A A,28 G A,31 G A,33 C A,34 U A,35 U A,202 SR A 5 2.05 25.4 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  10 A A,11 G A,12 G A,23 C A,24 G A,26 C A,28 G A, 31 G A,33 C A,34 U A,35 U A,202 SR A 6 2.19 28.6 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  10 A A,11 G A,12 G A,13 A A,14 U A,19 G A,22 A A, 23 C A,25 C A,26 C A,28 G A,31 G A,33 C A,34 U A, 35 U A,202 SR A,219 SR A 7 2.07 41.2 -0.40 -0.80 3.4 0 0 0 0 0 0 0 0  4 C A,5 C A,6 C A,7 G A,8 A A,9 A A,10 A A,11 G A, 27 A A,28 G A,29 A A,31 G A,33 C A,34 U A,35 U A, 202 SR A,206 SR A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program and visualized using Pymol 0.97rc.