PDBsum entry 3e5b Go to PDB code:  Pore analysis for: 3e5b calculated with MOLE 2.0 PDB id 3e5b Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   13 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 2.74 4.20 57.6 0.03 -0.06 11.1 87 3 4 7 6 2 2 0   2 2.23 3.36 63.1 -0.02 -0.14 7.9 88 4 4 8 6 2 3 0   3 1.63 3.95 72.0 -0.75 -0.42 10.7 81 4 5 6 9 5 1 0   4 1.64 3.93 79.9 -0.74 -0.43 11.3 84 5 5 6 11 5 1 0   5 1.61 3.38 82.0 -0.82 -0.45 11.1 83 5 6 9 7 5 1 0   6 1.61 4.07 85.6 -1.85 -0.58 19.7 85 8 9 8 9 4 0 0   7 1.63 1.75 86.6 -0.79 -0.43 11.7 85 6 5 10 11 5 2 0   8 1.66 3.27 90.7 -1.14 -0.48 15.8 84 7 8 8 11 6 1 0   9 1.61 3.73 91.7 -1.44 -0.54 17.8 83 7 8 9 9 5 2 0   10 1.60 1.74 93.1 -1.21 -0.49 15.8 83 8 8 9 10 5 1 0   11 1.66 3.87 106.4 -1.16 -0.53 14.4 84 9 8 10 11 6 1 0   12 1.73 1.83 116.1 -0.72 -0.47 11.5 84 6 9 10 14 8 2 0   13 1.67 1.81 117.1 -0.89 -0.50 12.6 84 6 9 11 12 7 2 0   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.